6I4N: Base Pair Morphology Parameters

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As of 21-Aug-2019 number of released structures: 10343

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NDB ID: 6I4N PDB ID: 6I4N

Base Pair Morphology Parameters

CSV Format

Model Number	Pair Number	Pair Name	Shear	Stretch	Stagger	Buckle	Propellor	Opening
1	3	A_DA3:DT22_B	0.502	0.196	-0.286	-25.638	-3.529	-5.786
1	6	A_DA7:DT18_B	0.237	0.133	0.162	-0.545	-16.819	-12.772
1	7	A_DA9:DT16_B	0.005	0.027	0.467	1.271	-11.692	1.426
1	1	A_DC1:DG24_B	0.757	-0.12	0.059	27.895	-16.984	-0.109
1	9	A_DC11:DG14_B	0.674	-0.178	0.398	0.171	-7.999	2.059
1	2	A_DG2:DC23_B	-1.846	-0.014	-0.074	-25.129	-30.47	16.193
1	10	A_DG12:DC13_B	-0.158	-0.087	0.198	3.244	-15.509	-1.424
1	4	A_DT4:DA21_B	-0.235	0.097	0.389	-18.089	-11.099	-4.36
1	5	A_DT6:DA19_B	-0.259	0.197	-0.108	1.107	-17.457	-12.097
1	8	A_DT10:DA15_B	-0.321	-0.037	0.511	4.46	-7.458	-3.769

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.