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A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 11-Dec-2019 number of released structures: 10507
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NDB ID:
6I4N
PDB ID:
6I4N
Base Pair Morphology Parameters
CSV Format
Model Number
Pair Number
Pair Name
Shear
Stretch
Stagger
Buckle
Propellor
Opening
1
3
A_DA3:DT22_B
0.502
0.196
-0.286
-25.638
-3.529
-5.786
1
6
A_DA7:DT18_B
0.237
0.133
0.162
-0.545
-16.819
-12.772
1
7
A_DA9:DT16_B
0.005
0.027
0.467
1.271
-11.692
1.426
1
1
A_DC1:DG24_B
0.757
-0.12
0.059
27.895
-16.984
-0.109
1
9
A_DC11:DG14_B
0.674
-0.178
0.398
0.171
-7.999
2.059
1
2
A_DG2:DC23_B
-1.846
-0.014
-0.074
-25.129
-30.47
16.193
1
10
A_DG12:DC13_B
-0.158
-0.087
0.198
3.244
-15.509
-1.424
1
4
A_DT4:DA21_B
-0.235
0.097
0.389
-18.089
-11.099
-4.36
1
5
A_DT6:DA19_B
-0.259
0.197
-0.108
1.107
-17.457
-12.097
1
8
A_DT10:DA15_B
-0.321
-0.037
0.511
4.46
-7.458
-3.769
The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures',
Nucleic Acids Res
.
31(17)
, 5108-21. Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures',
Nat Protoc
.
3(7)
, 1213-27.
