6I4N: Base Pair Morphology Step Parameters

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NDB ID: 6I4N PDB ID: 6I4N

Base Pair Morphology Step Parameters

CSV Format

Model Number	Step Number	Step Name	Shift	Slide	Rise	Tilt	Roll	Twist	X-Displacement	Y-Displacement	Helical Rise	Inclination	Tip	Helical Twist
1	3	AA_DA3DT4:DA21DT22_BB	0.151	-0.598	3.255	-4.007	4.16	24.849	-2.517	-1.46	3.053	9.504	9.155	25.501
1	6	AA_DA7DA9:DT16DT18_BB	2.225	-0.464	6.543	0.525	13.921	63.385	-1.604	-2.034	6.347	13.082	-0.494	64.742
1	7	AA_DA9DT10:DA15DT16_BB	-0.192	-1.294	3.39	0.757	5.806	26.97	-4.123	0.586	3.043	12.265	-1.599	27.586
1	1	AA_DC1DG2:DC23DG24_BB	1.614	-0.216	5.391	11.589	-3.288	48.255	0.156	-0.465	5.616	-3.951	-13.924	49.648
1	9	AA_DC11DG12:DC13DG14_BB	-1.311	0.702	3.212	-1.123	3.054	39.266	0.681	1.813	3.29	4.535	1.668	39.395
1	2	AA_DG2DA3:DT22DC23_BB	-3.152	0.413	3.577	-8.48	-7.705	36.252	1.806	3.557	4.021	-12.018	13.228	37.962
1	4	AA_DT4DT6:DA19DA21_BB	-2.156	0.346	6.158	-1.141	4.117	68.043	0.016	1.842	6.199	3.676	1.018	68.16
1	5	AA_DT6DA7:DT18DA19_BB	0.235	0.54	3.313	-4.414	6.739	41.079	0.035	-0.802	3.316	9.493	6.218	41.828
1	8	AA_DT10DC11:DG14DA15_BB	2.261	0.429	3.61	12.525	3.099	38.301	0.196	-1.557	4.142	4.568	-18.462	40.339

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.