A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 9-Oct-2019 number of released structures: 10416
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NDB ID: 6I4O  PDB ID: 6I4O 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
13A_DA3:DT22_B-0.0210.0690.0574.227-16.4998.527
16A_DA7:DT18_B0.241-0.0320.4063.429-12.278-2.707
17A_DA9:DT16_B0.035-0.010.053-10.681-16.6345.011
11A_DC1:DG24_B0.389-0.096-0.02-8.0599.66-0.878
19A_DC11:DG14_B0.522-0.14-0.014-13.299-7.071-1.459
12A_DG2:DC23_B-0.293-0.082-0.296.385-4.229-2.054
110A_DG12:DC13_B-0.217-0.053-0.14-10.8324.473-1.901
14A_DT4:DA21_B-0.104-0.012-0.0411.651-16.0784.013
15A_DT6:DA19_B-0.07-0.0380.381-4.434-14.136-3.125
18A_DT10:DA15_B-0.0170.0110.3-13.406-16.985-0.159

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.