A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 11-Dec-2019 number of released structures: 10507
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NDB ID: 6IPG  PDB ID: 6IPG 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
17T_DA7:DT3_P0.099-0.1330.3448.267-13.75-0.576
11T_DC1:DG4_D0.081-0.0950.426-10.664-13.13-2.197
14T_DC4:DG1_D0.265-0.149-0.30612.1112.851-1.47
15T_DC5:8OG5_P0.163-0.1590.125-29.05312.953-2.154
18T_DC8:DG2_P0.234-0.183-0.14310.984-11.174-0.647
12T_DG2:DC3_D-0.165-0.1440.095-0.896-10.367-1.14
13T_DG3:DC2_D-0.244-0.1590.1910.306-8.408-2.607
19T_DG9:DC1_P-0.124-0.160.039-3.941-10.285-1.155
16T_DT6:DA4_P-0.038-0.127-0.047-0.2184.8231.422

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.