A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 22-Jun-2022 number of released structures: 12128
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NDB ID: 6J4F  PDB ID: 6J4F 


Base Pair Hydrogen Bonding Classification

CSV Format

Model NumberPair NumberPair NameLeontis / Westhof ClassificationSaenger Classification
18C_DA9:DT8_D120
111C_DA12:DT5_D120
12C_DC3:DG14_D119
13C_DC4:DG13_D119
19C_DC10:DG7_D119
110C_DC11:DG6_D119
113C_DC14:DG3_D119
11C_DG2:DC15_D119
17C_DG8:DC9_D119
112C_DG13:DC4_D119
114C_DG15:DC2_D119
14C_DT5:DA12_D120
15C_DT6:DA11_D120
16C_DT7:DA10_D120
122G_DA9:DT8_H120
125G_DA12:DT5_H120
116G_DC3:DG14_H119
117G_DC4:DG13_H119
123G_DC10:DG7_H119
124G_DC11:DG6_H119
127G_DC14:DG3_H119
115G_DG2:DC15_H119
121G_DG8:DC9_H119
126G_DG13:DC4_H119
128G_DG15:DC2_H119
118G_DT5:DA12_H120
119G_DT6:DA11_H120
120G_DT7:DA10_H120

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)