A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 21-Aug-2019 number of released structures: 10343
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NDB ID: 6J9C  PDB ID: 6J9C 


Base Pair Hydrogen Bonding Classification

CSV Format

Model NumberPair NumberPair NameLeontis / Westhof ClassificationSaenger Classification
11B_DA2:DT15_C120
18B_DA9:DT8_C120
112B_DA13:DT4_C120
14B_DC5:DG12_C119
17B_DC8:DG9_C119
16B_DG7:DC10_C119
110B_DG11:DC6_C119
111B_DG12:DC5_C119
12B_DT3:DA14_C120
13B_DT4:DA13_C120
15B_DT6:DA11_C120
19B_DT10:DA7_C120
113B_DT14:DA3_C120
114E_DA2:DT15_F120
121E_DA9:DT8_F120
125E_DA13:DT4_F120
117E_DC5:DG12_F119
120E_DC8:DG9_F119
119E_DG7:DC10_F119
123E_DG11:DC6_F119
124E_DG12:DC5_F119
115E_DT3:DA14_F120
116E_DT4:DA13_F120
118E_DT6:DA11_F120
122E_DT10:DA7_F120
126E_DT14:DA3_F120
127E_DT15:DA2_F120

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)