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As of 11-Dec-2019 number of released structures: 10507
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NDB ID: 6J9C  PDB ID: 6J9C 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
11BB_DA2DT3:DA14DT15_CC-0.086-0.813.298-0.4641.15432.866-1.6290.0723.272.0380.8232.889
18BB_DA9DT10:DA7DT8_CC-1.017-0.6083.157-1.696-0.61231.726-1.0021.5543.216-1.1183.09931.776
112BB_DA13DT14:DA3DT4_CC0.081-0.5683.1393.651-2.54632.438-0.5830.4673.163-4.531-6.49832.733
14BB_DC5DT6:DA11DG12_CC0.064-0.13.2520.4832.78629.844-0.764-0.0263.235.394-0.93629.974
17BB_DC8DA9:DT8DG9_CC-0.050.023.62.836-4.2341.8330.5070.3913.571-5.897-3.95442.128
16BB_DG7DC8:DG9DC10_CC-0.39-0.6973.2780.762-0.11532.62-1.220.8273.27-0.205-1.35732.629
110BB_DG11DG12:DC5DC6_CC-1.3150.473.203-4.0134.29233.0160.1011.6123.3687.4796.99233.52
111BB_DG12DA13:DT4DC5_CC0.007-0.0883.129-1.7612.60437.242-0.466-0.2333.1134.0692.75237.369
12BB_DT3DT4:DA13DA14_CC-0.254-0.3143.3060.515-2.71734.876-0.1070.5013.316-4.525-0.85834.982
13BB_DT4DC5:DG12DA13_CC0.122-0.393.078-0.2310.3544.714-0.543-0.183.0750.460.30444.716
15BB_DT6DG7:DC10DA11_CC1.0770.8593.2270.008-1.1937.6341.482-1.6683.199-1.844-0.01237.652
19BB_DT10DG11:DC6DA7_CC1.0530.8013.234-0.4144.05537.9810.713-1.6623.2886.2080.63438.191
113EE_DA2DT3:DA14DT15_FF0.192-0.6643.121-3.213-0.26133.021-1.12-0.8513.094-0.4595.63633.174
120EE_DA9DT10:DA7DT8_FF-0.923-0.6723.2442.739-1.22432.807-0.982.0873.181-2.162-4.83732.94
124EE_DA13DT14:DA3DT4_FF-0.59-0.683.202-0.503-0.82533.523-1.0450.9423.226-1.4310.87233.536
116EE_DC5DT6:DA11DG12_FF0.0670.0423.233-1.2910.47932.975-0.006-0.3343.2280.8432.27433.003
119EE_DC8DA9:DT8DG9_FF0.309-0.4863.283-3.726-6.18740.364-0.011-0.8523.279-8.885.34840.979
118EE_DG7DC8:DG9DC10_FF-0.455-0.3283.305-1.653-0.28831.78-0.5460.5243.327-0.5263.01731.823
122EE_DG11DG12:DC5DC6_FF-1.0040.3343.368-3.3791.19435.8810.3631.1223.4541.9325.46836.053
123EE_DG12DA13:DT4DC5_FF0.204-0.5063.261-1.15-1.54338.223-0.578-0.4563.271-2.3551.75538.27
114EE_DT3DT4:DA13DA14_FF-0.218-0.2253.391-0.337-5.40536.240.4150.2993.39-8.630.53936.629
115EE_DT4DC5:DG12DA13_FF-0.011-0.3733.212-0.9851.37843.272-0.637-0.0793.1981.8681.33643.303
117EE_DT6DG7:DC10DA11_FF0.7071.2273.4221.3011.37938.4391.681-0.9033.4832.093-1.97538.484
121EE_DT10DG11:DC6DA7_FF1.1840.7443.3821.3422.9837.8130.745-1.6423.4674.588-2.06637.949
125EE_DT14DT15:DA2DA3_FF-0.182-0.2263.2860.3942.01438.482-0.5930.3253.2693.053-0.59838.535

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.