A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 14-Oct-2020 number of released structures: 11024
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NDB ID: 6JQ6  PDB ID: 6JQ6 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
15UU_A3C4:G16U17_UU0.567-1.5573.0521.6014.26733.399-3.316-0.7422.867.382-2.7733.699
111UU_A51U52:A43U44_UU-0.183-1.3683.373-3.1982.01833.367-2.705-0.2183.293.5015.54833.574
114UU_A54G55:C40U41_UU0.52-2.0223.6475.4177.22831.71-4.8750.0633.16512.905-9.67132.94
117UU_A57U58:A36U37_UU0.629-1.3443.29-0.4773.21229.553-3.281-1.3253.126.2730.93229.727
119UU_A60G61:C33U34_UU0.428-1.1913.6895.74212.28739.422-3.0920.0593.22317.594-8.22241.602
16UU_C4U5:A15G16_UU-0.481-1.8033.479-1.696.69926.624-5.4420.5962.96914.2433.59327.49
122UU_C64G66:G63G31_UU2.279-1.6325.982-16.97415.92526.536-6.351-7.6622.73928.67130.55935.159
18UU_G6U7:A11C14_UU-2.161-2.2593.2120.475-2.79685.507-1.61.6023.261-2.059-0.3585.545
12UU_G30U1:A19C20_UU-2.649-2.42-1.77486.122-151.953-39.2490.253-1.869-1.34977.51843.935-174.972
110UU_G50A51:U44C45_UU-1.015-1.833.3481.491-1.19729.606-3.3152.3063.364-2.339-2.91529.666
115UU_G55U56:A38C40_UU1.209-0.7133.049-2.977-0.6247.432-0.838-1.7212.981-0.773.69747.524
120UU_G61U62:G32C33_UU-0.044-1.5873.212-0.8018.90337.825-3.396-0.0252.78213.5051.21538.829
13UU_U1U2:A18A19_UU0.63-2.3693.241-0.862-1.27815.453-7.763-3.013.384-4.7393.19515.529
14UU_U2A3:U17A18_UU-0.339-1.9622.9061.543-2.95129.402-3.270.9623.062-5.791-3.02729.586
17UU_U5G6:C14A15_UU0.404-1.443.466-1.62813.04437.79-3.596-0.7762.81819.4342.42539.932
19UU_U7G8:U39A11_UU3.801-0.1393.342-0.5855.319-48.029-0.2564.5983.381-6.512-0.716-48.309
11UU_U28G30:C20A21_UU-1.344-6.955-1.653-160.45953.003100.637-3.2861.272-1.85226.89881.429172.974
112UU_U52U53:A42A43_UU0.13-1.0843.039-0.3987.26429.928-3.307-0.3152.70513.810.75830.78
113UU_U53A54:U41A42_UU0.212-1.1443.1340.1196.98133.577-2.955-0.3422.84711.925-0.20334.275
116UU_U56A57:U37A38_UU0.827-1.2333.3483.1729.74636.893-3.093-0.8682.99715.047-4.89738.243
118UU_U58A60:U34A36_UU0.1061.8013.0255.646-8.55966.6291.9220.1012.803-7.744-5.10967.323
121UU_U62C64:G31G32_UU-1.551-1.452.75211.2096.41537.805-2.6763.2351.979.566-16.71539.874

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.