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As of 14-Oct-2020 number of released structures: 11024
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NDB ID: 6K1I  PDB ID: 6K1I 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
12II_DA-70DT-69:DA69DT70_JJ-0.1-0.3163.135-0.18-0.58831.909-0.4730.1513.14-1.070.32731.915
14II_DA-68DT-67:DA67DT68_JJ-0.041-0.2143.042-0.8633.73331.403-1.032-0.0722.9976.8651.58731.63
16II_DA-66DT-65:DA65DT66_JJ-0.405-0.8653.118-0.202-6.49230.357-0.3910.723.231-12.2220.3831.028
118II_DA-54DG-53:DC53DT54_JJ0.165-0.0233.049-1.6055.64329.333-1.132-0.632.97911.0043.1329.901
127II_DA-45DA-44:DT44DT45_JJ-0.2810.7743.039-9.3970.42137.6461.118-0.663.0290.6414.29138.762
128II_DA-44DT-43:DA43DT44_JJ-0.572-0.4573.148-2.9772.26736.883-1.0120.5153.1513.5724.6937.066
137II_DA-35DG-34:DC34DT35_JJ0.6490.8043.897.4969.44430.445-0.6180.4714.00117.162-13.62232.693
139II_DA-33DC-32:DG32DT33_JJ0.811-0.3313.33.5123.40735.09-1.053-0.8083.3175.617-5.79135.419
141II_DA-31DG-30:DC30DT31_JJ-0.024-0.1153.128-4.5652.51735.848-0.524-0.5743.0934.0627.36836.213
147II_DA-25DG-24:DC24DT25_JJ-0.5660.3433.039-5.5782.134.5420.2720.1483.1053.5039.30835.037
150II_DA-22DC-21:DG21DT22_JJ-0.3810.8152.711-6.6499.41835.6680.191-0.1692.85114.90310.52137.428
157II_DA-15DA-14:DT14DT15_JJ0.5080.0713.3270.862-3.70633.9070.719-0.7273.313-6.331-1.47234.114
158II_DA-14DA-13:DT13DT14_JJ0.25-0.3743.097-3.518-5.18643.108-0.029-0.6593.091-7.0144.75743.54
159II_DA-13DC-12:DG12DT13_JJ-0.052-1.0073.6186.3550.27636.396-1.6311.033.5520.438-10.07936.929
163II_DA-9DC-8:DG8DT9_JJ0.051-0.3913.373-9.0718.88334.921-1.826-1.3173.0814.23314.53537.089
167II_DA-5DC-4:DG4DT5_JJ0.4420.3653.204-1.072-6.76435.4211.519-0.8623.07-10.991.74236.056
178II_DA6DC7:DG-7DT-6_JJ0.6171.0263.18-1.54-9.8140.8792.383-1.012.847-13.82.16642.017
188II_DA16DA17:DT-17DT-16_JJ-1.3450.4083.18-8.679-5.50234.2831.470.9223.31-9.08414.32935.746
189II_DA17DC18:DG-18DT-17_JJ-0.129-0.4993.2390.421-2.66833.718-0.4290.2893.266-4.59-0.72433.823
195II_DA23DC24:DG-24DT-23_JJ-0.031-0.8793.194.3043.76836.441-1.8810.6093.0645.979-6.8336.873
198II_DA26DG27:DC-27DT-26_JJ1.5580.9573.401-1.664-14.6936.3363.155-2.5222.756-22.4472.54339.134
1100II_DA28DA29:DT-29DT-28_JJ0.3250.1412.977-1.816-1.97635.5010.491-0.7712.946-3.2342.97435.599
1101II_DA29DG30:DC-30DT-29_JJ0.522-0.8753.323-1.0354.12429.071-2.608-1.253.1518.1612.04829.374
1108II_DA36DC37:DG-37DT-36_JJ-0.2770.3243.551-8.324-13.05637.9552.017-0.5933.262-19.1312.19740.884
1111II_DA39DG40:DC-40DT-39_JJ-0.0640.1483.7-0.90712.40232.371-1.935-0.0533.5221.2911.55634.617
1118II_DA46DG47:DC-47DT-46_JJ-0.0821.1863.35-3.66-21.30838.0363.539-0.2232.391-29.935.1443.552
1122II_DA50DC51:DG-51DT-50_JJ0.46-1.0983.444-2.3992.69333.801-2.325-1.1843.314.6154.11133.987
1129II_DA57DG58:DC-58DT-57_JJ0.9830.3592.719-4.5884.72229.294-0.101-2.672.5649.1928.92930.009
1131II_DA59DC60:DG-60DT-59_JJ-0.127-0.5173.276-1.5394.3533.911-1.559-0.0253.1897.4152.62334.215
1137II_DA65DT66:DA-66DT-65_JJ-0.345-0.4283.1715.686-5.87331.9090.221.5533.093-10.47-10.13632.913
1139II_DA67DT68:DA-68DT-67_JJ0.155-0.363.132-1.1822.32827.305-1.306-0.6043.0824.9162.49727.428
1141II_DA69DT70:DA-70DT-69_JJ0.371-0.5653.010.7140.83333.783-1.096-0.5323.0021.434-1.22933.801
11II_DC-71DA-70:DT70DG71_JJ-0.421-0.0573.625-1.580.25634.541-0.140.4383.6390.432.65834.577
18II_DC-64DC-63:DG63DG64_JJ0.169-0.1313.5830.8556.14135.084-1.191-0.143.51410.09-1.40535.611
19II_DC-63DC-62:DG62DG63_JJ0.355-0.2523.4681.1766.7138.666-1.221-0.3813.38810.039-1.75939.239
110II_DC-62DG-61:DC61DG62_JJ0.0030.5122.9441.8433.01627.0540.4010.4122.9766.413-3.91827.279
115II_DC-57DC-56:DG56DG57_JJ0.5351.4353.3362.1761.91539.1461.9-0.5273.4232.854-3.24239.249
116II_DC-56DG-55:DC55DG56_JJ-0.3642.7543.862-0.573-4.55443.8144.1610.4243.577-6.0830.76644.042
121II_DC-51DC-50:DG50DG51_JJ0.533-0.8393.5714.2987.89635.745-2.482-0.2163.35712.62-6.86936.822
122II_DC-50DG-49:DC49DG50_JJ-0.1280.8132.99-0.1737.62129.360.1010.2113.09814.7260.33530.312
124II_DC-48DT-47:DA47DG48_JJ-0.087-0.0853.37-3.6956.35429.958-1.435-0.5783.2712.0647.01530.827
126II_DC-46DA-45:DT45DG46_JJ-0.3812.3253.659-0.088-0.48335.6413.8760.6073.629-0.790.14435.645
134II_DC-38DG-37:DC37DG38_JJ-0.6850.83.1384.4295.39337.2760.5651.6023.1218.347-6.85537.901
140II_DC-32DA-31:DT31DG32_JJ-0.033-0.1333.282.50911.65128.867-2.4620.5392.9922.214-4.78431.182
143II_DC-29DT-28:DA28DG29_JJ-1.251-0.3513.3870.9193.08131.59-1.2212.4593.3015.64-1.68331.749
145II_DC-27DT-26:DA26DG27_JJ-2.1770.5893.272-4.568-14.47135.0742.7542.7483.055-22.7427.17938.121
149II_DC-23DA-22:DT22DG23_JJ-0.776-0.6763.2728.3788.11525.623-3.1763.442.56817.206-17.76428.112
151II_DC-21DC-20:DG20DG21_JJ-0.963-1.673.796-5.80219.65927.354-6.0990.6852.2835.87510.58834.064
152II_DC-20DG-19:DC19DG20_JJ0.0061.1663.4257.6916.29529.0560.8581.6323.48412.108-14.79330.674
154II_DC-18DT-17:DA17DG18_JJ-0.3820.1453.115-0.6927.36932.112-0.9490.563.07913.1051.23132.932
160II_DC-12DG-11:DC11DG12_JJ0.2990.3913.24-1.1611.38531.029-1.265-0.7243.1720.432.08133.023
162II_DC-10DA-9:DT9DG10_JJ-0.580.3663.3084.4387.36429.479-0.7761.9813.18614.099-8.49630.681
164II_DC-8DG-7:DC7DG8_JJ0.4070.3322.8713.6765.74729.972-0.383-0.1232.91110.934-6.99430.721
168II_DC-4DG-3:DC3DG4_JJ-0.2780.4823.09-3.9311.47440.0560.541-0.0193.1172.1455.71940.266
170II_DC-2DG-1:DC1DG2_JJ-0.2920.5273.393-4.1315.9530.875-0.196-0.273.44110.9877.62831.693
172II_DC0DT1:DA-1DG0_JJ0.127-0.3453.6545.7654.47231.419-1.5080.9143.5398.121-10.4732.234
176II_DC4DT5:DA-5DG-4_JJ0.281.13.4176.955-0.68738.0071.7520.4763.395-1.043-10.5738.621
179II_DC7DC8:DG-8DG-7_JJ-0.3760.0043.333-5.67210.10834.08-1.48-0.2253.22416.6599.34935.942
180II_DC8DG9:DC-9DG-8_JJ-0.0350.4283.1312.5653.34534.4430.2250.4383.1475.622-4.31134.692
182II_DC10DG11:DC-11DG-10_JJ-0.4530.443.196-5.9024.25334.8280.101-0.1163.2577.0119.72935.557
190II_DC18DC19:DG-19DG-18_JJ1.285-0.0313.5623.60610.71235.758-1.609-1.4763.51816.931-5.737.446
191II_DC19DG20:DC-20DG-19_JJ0.0330.2463.141-3.13612.50928.095-1.919-0.6592.9624.2186.07230.859
193II_DC21DC22:DG-22DG-21_JJ0.454-0.8573.7596.3225.95731.186-2.740.4593.5610.819-11.48332.344
194II_DC22DA23:DT-23DG-22_JJ0.191-0.6662.978-1.67316.06527.826-3.688-0.6042.25430.3813.16532.094
196II_DC24DT25:DA-25DG-24_JJ0.3080.1973.482.7671.01933.4420.162-0.0493.4981.766-4.79633.568
1103II_DC31DG32:DC-32DG-31_JJ0.0590.1813.6620.9352.04332.792-0.0720.0763.6663.613-1.65432.867
1105II_DC33DT34:DA-34DG-33_JJ0.7460.0723.5694.4183.56136.542-0.418-0.5183.6225.638-6.99436.965
1109II_DC37DT38:DA-38DG-37_JJ0.7520.5352.7230.97-1.75931.7561.243-1.2252.711-3.21-1.7731.818
1114II_DC42DT43:DA-43DG-42_JJ0.6350.4283.8541.31512.28734.484-1.362-0.7943.80219.949-2.13536.568
1116II_DC44DC45:DG-45DG-44_JJ-0.6350.3013.2159.041-10.53330.622.1552.5042.682-18.782-16.12133.551
1117II_DC45DA46:DT-46DG-45_JJ-0.5821.3672.9942.156-10.85140.4892.8841.0072.529-15.336-3.04841.912
1121II_DC49DA50:DT-50DG-49_JJ-0.790.2412.9497.051-3.32830.7370.9762.582.666-6.155-13.0431.687
1123II_DC51DG52:DC-52DG-51_JJ0.4780.0593.072-0.8829.14433.555-1.216-0.9272.97215.481.49434.755
1132II_DC60DC61:DG-61DG-60_JJ0.639-0.2322.8827.0279.48326.267-2.3750.1262.71619.653-14.56228.754
1133II_DC61DG62:DC-62DG-61_JJ-0.7851.6473.607-3.61711.18233.1670.7260.6533.99918.8676.10435.132
1136II_DC64DA65:DT-65DG-64_JJ0.079-0.1293.4450.675-2.0539.2940.064-0.0333.448-3.046-1.00239.351
111II_DG-61DG-60:DC60DC61_JJ-0.244-0.4393.7364.38316.18933.995-3.0041.0073.16125.831-6.99437.798
112II_DG-60DT-59:DA59DC60_JJ-0.443-0.1813.156-9.6114.2232.306-0.975-0.7573.117.34516.73133.926
114II_DG-58DC-57:DG57DC58_JJ-0.7310.5322.952-4.425-2.7435.3781.2270.612.971-4.4797.23335.747
117II_DG-55DA-54:DT54DC55_JJ-0.3992.2882.775-8.076-9.94443.8593.639-0.0432.268-12.98610.54845.603
119II_DG-53DG-52:DC52DC53_JJ-0.0170.4163.5194.1758.24236.448-0.5260.623.50412.923-6.54737.563
120II_DG-52DC-51:DG51DC52_JJ-1.178-0.1733.317-7.464.02334.407-0.9060.7853.4486.67612.37935.405
123II_DG-49DC-48:DG48DC49_JJ-0.163-0.0483.52-2.5890.09541.616-0.078-0.0653.5240.1333.6441.693
131II_DG-41DG-40:DC40DC41_JJ-0.553-0.1163.227-5.29917.69333.215-2.4440.1742.86428.3888.50337.878
132II_DG-40DT-39:DA39DC40_JJ0.075-0.83.785-8.312.24333.397-1.752-1.613.6033.82514.16934.458
135II_DG-37DT-36:DA36DC37_JJ-0.336-0.0293.545-9.238.62328.898-1.828-1.283.34916.32917.4831.484
138II_DG-34DA-33:DT33DC34_JJ-0.9040.7712.447-24.854-3.15139.5081.196-0.5892.508-4.1933.05546.512
142II_DG-30DC-29:DG29DC30_JJ0.672-0.6723.896-2.8918.06138.361-2.118-1.4013.62912.0854.33439.27
148II_DG-24DC-23:DG23DC24_JJ0.274-0.7053.29-3.8673.37738.782-1.455-0.873.1795.0585.79239.107
153II_DG-19DC-18:DG18DC19_JJ-0.8360.2272.933-6.7172.23534.2450.0660.4553.0463.74611.25734.948
161II_DG-11DC-10:DG10DC11_JJ-0.005-0.3143.19-4.2412.34835.564-0.837-0.5823.1433.8226.90435.883
165II_DG-7DT-6:DA6DC7_JJ-1.2471.053.3412.02-10.48742.4292.3921.8652.953-14.222-2.73943.692
169II_DG-3DC-2:DG2DC3_JJ0.904-0.0123.31611.3461.35233.658-0.230.2783.432.256-18.92935.492
171II_DG-1DC0:DG0DC1_JJ-0.36-1.1463.706-2.06710.20638.13-3.0130.2673.31715.2773.09439.475
174II_DG2DT3:DA-3DC-2_JJ-0.84-0.1233.048-11.585-1.64632.0480.046-0.3713.156-2.86520.16434.065
181II_DG9DC10:DG-10DC-9_JJ-0.083-0.5633.5190.65612.27930.895-3.1410.263.07721.988-1.17433.197
183II_DG11DT12:DA-12DC-11_JJ-0.1-0.6213.5081.5832.75433.104-1.5750.4563.4384.82-2.7733.252
192II_DG20DC21:DG-21DC-20_JJ1.041-0.6443.5643.71-0.52433.694-1.011-1.1243.664-0.9-6.37633.896
199II_DG27DA28:DT-28DC-27_JJ-1.1920.6783.8213.4325.04837.2750.2892.3593.7577.834-5.32537.754
1102II_DG30DC31:DG-31DC-30_JJ-0.009-0.7493.4050.11413.8337.468-2.7070.0272.95820.688-0.1739.853
1104II_DG32DC33:DG-33DC-32_JJ-0.218-0.1573.32-3.9273.55635.958-0.756-0.2073.2955.7226.31936.333
1112II_DG40DT41:DA-41DC-40_JJ-0.415-0.6493.02-1.5946.94631.903-2.2450.4872.83612.4442.85632.669
1119II_DG47DG48:DC-48DC-47_JJ0.0890.4014.0768.7915.49438.005-1.5171.0543.87922.356-12.68241.833
1120II_DG48DC49:DG-49DC-48_JJ-0.2680.0653.221-16.85-1.70740.3110.252-1.2713.086-2.35623.24943.588
1124II_DG52DT53:DA-53DC-52_JJ0.431-0.4743.6648.1496.96835.787-1.7770.5373.52511.038-12.90837.308
1126II_DG54DT55:DA-55DC-54_JJ-0.0431.142.605-1.127-4.14139.3212.064-0.0392.477-6.1311.66839.545
1128II_DG56DA57:DT-57DC-56_JJ-0.7011.7773.818-0.4522.18843.4172.150.8953.9052.9550.6143.471
1130II_DG58DA59:DT-59DC-58_JJ-1.1290.6243.404-2.559-2.56939.6541.2281.3493.422-3.7783.76339.813
1134II_DG62DG63:DC-63DC-62_JJ0.5350.6453.1871.66711.41532.635-0.702-0.643.24719.567-2.85834.561
1135II_DG63DC64:DG-64DC-63_JJ-0.118-0.2173.478-8.884-1.07337.612-0.187-0.9933.422-1.63713.54638.624
13II_DT-69DA-68:DT68DA69_JJ0.0430.8593.3290.457-2.70943.041.438-0.0133.272-3.688-0.62243.124
15II_DT-67DA-66:DT66DA67_JJ-0.1740.0383.406-0.0561.00736.994-0.0810.2663.4071.5860.08937.007
17II_DT-65DC-64:DG64DA65_JJ0.919-0.3573.2662.364-3.14541.028-0.164-1.0483.329-4.474-3.36441.208
113II_DT-59DG-58:DC58DA59_JJ0.5270.7833.5097.2495.13137.8270.4870.1843.6177.784-10.99738.818
125II_DT-47DC-46:DG46DA47_JJ0.1262.3413.5733.643-14.90352.0693.4930.0862.855-16.572-4.05154.131
129II_DT-43DT-42:DA42DA43_JJ1.0210.4913.0873.9293.30139.8770.353-1.0553.1984.815-5.73340.192
130II_DT-42DG-41:DC41DA42_JJ0.6371.1743.6561.37420.32220.343-3.499-0.8883.45645.386-3.06928.711
133II_DT-39DC-38:DG38DA39_JJ0.4580.1883.2116.392-1.23837.6230.4430.1013.235-1.902-9.82138.162
136II_DT-36DA-35:DT35DA36_JJ-1.3641.8213.387-5.172-21.64546.9423.4841.2312.504-25.5626.10751.679
144II_DT-28DC-27:DG27DA28_JJ0.7911.1143.2532.204-2.89237.5512.092-0.9423.202-4.479-3.41337.72
146II_DT-26DA-25:DT25DA26_JJ1.8251.2533.4298.034-8.30939.0352.788-1.6763.4-12.116-11.71440.646
155II_DT-17DT-16:DA16DA17_JJ1.3210.7583.3774.816-11.60137.9262.486-1.3663.16-17.28-7.17439.879
156II_DT-16DA-15:DT15DA16_JJ-0.0190.8583.1623.69-7.35634.3452.440.5462.905-12.241-6.1435.288
166II_DT-6DA-5:DT5DA6_JJ0.5822.1063.7391.211-9.98143.2193.792-0.653.215-13.337-1.61844.318
173II_DT1DG2:DC-2DA-1_JJ0.0470.3933.5341.49711.59832.467-1.3270.1783.46619.954-2.57534.455
175II_DT3DC4:DG-4DA-3_JJ0.6030.2242.9338.902-0.71935.7930.4440.1562.988-1.148-14.21236.855
177II_DT5DA6:DT-6DA-5_JJ-0.3332.0933.555-6.148-2.69642.9983.105-0.1893.438-3.6528.32743.495
184II_DT12DT13:DA-13DA-12_JJ0.003-0.2793.292-0.533-2.16937.387-0.147-0.0753.302-3.380.8337.452
185II_DT13DT14:DA-14DA-13_JJ-0.039-0.5523.2670.691-4.25640.354-0.3180.1343.305-6.148-0.99940.575
186II_DT14DT15:DA-15DA-14_JJ-0.266-0.3183.583-1.641-0.80735.007-0.3950.1713.598-1.342.72635.054
187II_DT15DA16:DT-16DA-15_JJ0.5341.3113.1116.384-13.94837.1163.349-0.1232.532-20.854-9.54540.057
197II_DT25DA26:DT-26DA-25_JJ-1.2081.383.23-3.915-10.35337.643.241.3562.873-15.6375.91339.177
1106II_DT34DT35:DA-35DA-34_JJ-1.1660.3233.212-0.176.58931.213-0.6042.0923.21712.0770.31231.884
1107II_DT35DA36:DT-36DA-35_JJ-1.0752.2753.599-5.333-9.86946.9973.5940.8773.184-12.1736.57848.243
1110II_DT38DA39:DT-39DA-38_JJ-0.0531.1023.1690.6922.47437.8721.3860.1673.233.806-1.06437.956
1113II_DT41DC42:DG-42DA-41_JJ0.057-0.2563.0714.51414.22929.813-2.6520.62.66125.726-8.16233.265
1115II_DT43DC44:DG-44DA-43_JJ0.7920.4313.839-17.3212.45645.1120.308-2.5163.3563.06821.6448.22
1125II_DT53DG54:DC-54DA-53_JJ-0.4651.7163.0120.5117.23532.7731.8140.8873.29812.63-0.89233.545
1127II_DT55DG56:DC-56DA-55_JJ0.3232.4813.695-1.213-10.33143.8074.219-0.5363.054-13.6191.59844.966
1138II_DT66DA67:DT-67DA-66_JJ0.6770.6043.4343.154-2.26538.8531.191-0.6133.437-3.394-4.72739.04
1140II_DT68DA69:DT-69DA-68_JJ-0.3540.1913.3833.2972.48942.6190.0060.8253.3533.415-4.52442.809
1142II_DT70DG71:DC-71DA-70_JJ-0.39-0.583.314-8.7889.57636.724-2.046-0.4913.08414.64713.44238.881

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.