A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 5-Aug-2020 number of released structures: 10886
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NDB ID: 6KCS  PDB ID: 6KCS 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
13B_DA6:DT9_B0.119-0.0510.019-7.407-10.987-0.247
17B_DA10:DT5_B0.271-0.2580.4323.901-21.6274.31
14B_DC7:DG8_B0.189-0.1070.31-4.024-10.636-0.661
18B_DC11:DG4_B0.424-0.508-0.0296.327-13.815-0.766
11B_DG4:DC11_B-0.424-0.508-0.029-6.327-13.815-0.766
15B_DG8:DC7_B-0.189-0.1070.314.024-10.636-0.661
12B_DT5:DA10_B-0.271-0.2580.432-3.901-21.6274.31
16B_DT9:DA6_B-0.119-0.0510.0197.407-10.987-0.247

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.