A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 5-Aug-2020 number of released structures: 10886
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NDB ID: 6KCS  PDB ID: 6KCS 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
13BB_DA6DC7:DG8DT9_BB-0.136-0.3823.198-3.9611.61229.308-1.081-0.5523.1643.1657.77529.612
17BB_DA10DC11:DG4DT5_BB0.1650.1053.2731.001-1.35932.9050.417-0.1213.27-2.397-1.76632.947
14BB_DC7DG8:DC7DG8_BB0.00.0123.0480.07.58535.168-0.990.02.98612.3750.035.951
11BB_DG4DT5:DA10DC11_BB-0.1650.1053.273-1.001-1.35932.9050.4170.1213.27-2.3971.76632.947
15BB_DG8DT9:DA6DC7_BB0.136-0.3823.1983.9611.61229.308-1.0810.5523.1643.165-7.77529.612
12BB_DT5DA6:DT9DA10_BB0.0572.2653.3752.051-10.99152.2463.1970.0622.879-12.321-2.29953.347
16BB_DT9DA10:DT5DA6_BB-0.0572.2653.375-2.051-10.99152.2463.197-0.0622.879-12.3212.29953.347

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.