A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 5-Aug-2020 number of released structures: 10886
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NDB ID: 6KQG  PDB ID: 6KQG 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
13G_DA6:DT22_H0.317-0.03-0.111-27.443-10.3994.691
110G_DA13:DT15_H-0.185-0.1881.1184.2031.2313.874
114G_DA18:U4_I0.5580.0480.099-3.726-5.5436.772
12G_DC5:DG23_H1.054-0.489-0.102-13.742-10.64510.624
15G_DC8:DG20_H-0.5690.3210.012-20.799-2.71617.166
16G_DC9:DG19_H0.8360.496-0.106-4.6245.34120.841
112G_DC16:G6_I0.141-0.14-0.38119.999-14.7347.475
11G_DG4:DC24_H1.4630.226-0.654-43.68911.047-2.116
17G_DG10:DC18_H-0.8020.074-0.565-3.604-21.27523.365
19G_DG12:DC16_H-0.2970.8440.5813.159-6.23628.839
113G_DG17:C5_I-0.172-0.098-0.031-2.668-8.5186.138
115G_DG19:C3_I-0.1-0.1640.0971.215-9.846.399
116G_DG20:C2_I2.210.2160.0881.729-17.18514.569
14G_DT7:DA21_H1.08-0.1241.294-36.612-5.4568.364
18G_DT11:DA17_H0.0690.0640.167-1.423-12.63917.747
111G_DT15:A7_I-0.079-0.3240.32913.261-12.410.132

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.