A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 20-Oct-2021 number of released structures: 11724
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NDB ID: 6KQL  PDB ID: 6KQL 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
13GG_DA6DT7:DA21DT22_HH0.009-0.7733.263-6.041-5.29141.129-0.522-0.6513.3-7.4458.50241.873
12GG_DC5DA6:DT22DG23_HH-0.979-1.8933.2976.2247.09332.32-4.3392.6282.60712.416-10.89433.634
15GG_DC8DC9:DG19DG20_HH-0.242-0.0383.522-0.77910.32833.991-1.6930.2743.37217.1781.29635.489
16GG_DC9DG10:DC18DG19_HH-0.0380.1133.4148.1588.25232.637-1.1471.3853.24514.139-13.97834.586
111GG_DC16DG17:C5G6_II0.118-1.953.9-3.23214.2928.07-6.379-0.8492.59827.246.16131.596
11GG_DG4DC5:DG23DC24_HH1.578-0.8695.14414.70327.52743.366-3.82-0.2484.24732.712-17.47252.984
17GG_DG10DT11:DA17DC18_HH0.586-0.3063.247-3.0085.14226.963-1.862-1.9443.05510.866.35227.601
19GG_DG12DA13:DT15DC16_HH0.873-0.0692.388-6.7739.95628.994-1.44-2.5082.00718.8912.85131.345
14GG_DT7DC8:DG20DA21_HH0.973-0.4823.1236.574-3.75233.015-0.227-0.623.284-6.496-11.38333.848
18GG_DT11DG12:DC16DA17_HH0.640.3813.7278.2826.14932.884-0.4820.4353.78210.543-14.20134.422
110GG_DT15DC16:G6A7_II0.198-0.7963.031-0.76711.80830.161-3.272-0.4752.54221.6721.40832.349

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.