A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 16-Sep-2020 number of released structures: 10951
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NDB ID: 6L3G  PDB ID: 6L3G 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
12D_DC13:DG18_D-0.698-0.2320.2520.523-29.732-10.603
14D_DC15:DG16_D-0.363-0.3780.4247.117-18.862-5.793
16D_DC17:DG14_D-0.1420.06-0.07414.064-4.3411.541
18D_DC19:DG12_D-0.349-0.407-0.042-1.3152.4732.919
11D_DG12:DC19_D0.349-0.407-0.0421.3152.4732.919
13D_DG14:DC17_D0.1420.06-0.074-14.064-4.3411.541
15D_DG16:DC15_D0.363-0.3780.424-7.117-18.862-5.793
17D_DG18:DC13_D0.698-0.2320.252-0.523-29.732-10.603

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.