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As of 13-Jan-2021 number of released structures: 11166
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NDB ID: 6L6Y  PDB ID: 6L6Y 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
17A_DA7:DT10_B-0.019-0.5030.006-0.30810.936-0.2
13A_DC3:DG14_B-0.008-0.0850.337-3.471-5.651-0.467
15A_DC5:DG12_B-0.021-0.4090.393-6.79-9.0264.183
112A_DC12:DG5_B0.1960.0180.1854.502-11.1286.995
113A_DC13:DG4_B-0.194-0.3210.297-3.362-8.569-4.743
11A_DG1:DC16_B-0.042-0.092-0.191-17.026-9.99-3.885
110A_DG10:DC7_B-0.263-0.0910.079-11.369-6.9153.117
12A_DT2:DA15_B-0.273-0.2660.58-7.342-13.184-0.81
14A_DT4:DA13_B-0.0470.152-0.68814.333-5.67511.599
16A_DT6:DA11_B-0.429-0.2850.485-5.4573.7762.464
18A_DT8:DA9_B-0.132-0.0250.15925.39415.585-2.026
19A_DT9:DA8_B0.246-0.3560.608-21.968-11.1341.639
111A_DT11:DA6_B0.198-0.2210.094-4.793-5.1561.17
114A_DT14:DA3_B0.380.781-0.54918.033-13.1431.895
120C_DA7:DT10_E0.517-0.1360.25811.4089.0256.461
116C_DC3:DG14_E0.1350.674-1.576-20.235-9.131-21.604
118C_DC5:DG12_E-0.4550.102-0.276-10.216-10.533-6.476
125C_DC12:DG5_E0.302-0.2860.105-1.463-17.1076.398
126C_DC13:DG4_E-0.8280.2410.329-1.485-4.5164.823
115C_DG1:DC16_E-0.804-0.6140.15-24.728-57.54518.574
123C_DG10:DC7_E-0.1840.136-0.201-20.887-10.026-1.033
128C_DG15:DC2_E-1.241-0.3160.25410.095-11.647-0.16
117C_DT4:DA13_E-0.5670.802-0.339-17.376-18.4334.675
119C_DT6:DA11_E-0.32-0.481-0.313-3.151-0.2330.551
121C_DT8:DA9_E-0.217-0.3920.50431.70925.576-5.06
122C_DT9:DA8_E-0.552-0.2290.69-13.59-9.0392.415
124C_DT11:DA6_E0.09-0.2280.076-6.905-11.4253.72
127C_DT14:DA3_E-0.618-0.2090.05511.316-14.0873.378

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.