A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 13-Jan-2021 number of released structures: 11166
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NDB ID: 6L6Y  PDB ID: 6L6Y 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
17AA_DA7DT8:DA9DT10_BB0.042-0.1723.013-0.08115.58120.392-4.4-0.1162.30337.7010.19625.613
13AA_DC3DT4:DA13DG14_BB1.0610.0592.74711.1022.52238.209-0.173-0.4182.9293.753-16.51839.808
15AA_DC5DT6:DA11DG12_BB0.466-0.2323.233.5813.04532.849-0.913-0.223.2275.35-6.29233.174
112AA_DC12DC13:DG4DG5_BB-1.148-1.3253.379-2.398-4.32727.955-1.6281.7463.622-8.8694.91428.381
113AA_DC13DT14:DA3DG4_BB0.127-0.0012.488.754-3.30335.2030.350.7282.432-5.346-14.16736.387
11AA_DG1DT2:DA15DC16_BB-0.108-0.183.125-6.4351.41128.033-0.664-1.1643.062.86413.05628.781
110AA_DG10DT11:DA6DC7_BB-0.564-0.6033.246-3.0095.7729.757-2.2830.4833.11711.075.77330.444
12AA_DT2DC3:DG14DA15_BB0.2-0.4193.1370.443-3.79334.891-0.146-0.2673.166-6.302-0.73635.093
14AA_DT4DC5:DG12DA13_BB-0.151-0.4243.887-6.1912.78628.286-3.556-1.0673.35124.3211.77331.588
16AA_DT6DA7:DT10DA11_BB0.2591.4173.752-0.34626.13222.334-3.214-0.5143.53250.1530.66334.251
18AA_DT8DT9:DA8DA9_BB0.3510.7815.8370.54348.44931.194-4.59-0.3073.93259.137-0.66357.111
19AA_DT9DG10:DC7DA8_BB0.410.5452.9933.61.04133.4250.785-0.1663.0341.804-6.23533.628
111AA_DT11DC12:DG5DA6_BB0.92-0.3132.953-2.1254.74634.953-1.139-1.7952.8297.8473.51335.326
118CC_DA7DT8:DA9DT10_EE-0.065-0.5483.268-1.41810.90916.382-6.587-0.4572.42433.7694.3919.712
114CC_DC3DT4:DA13DG14_EE1.467-0.6552.939-3.1128.06825.267-3.194-3.8632.42217.7916.86326.683
116CC_DC5DT6:DA11DG12_EE0.5820.033.0693.4536.32837.518-0.71-0.4763.0739.728-5.30938.18
123CC_DC12DC13:DG4DG5_EE-0.2470.083.4-2.5654.80928.25-0.966-0.1033.3759.7375.19328.761
124CC_DC13DT14:DA3DG4_EE-0.1710.6932.9643.1693.83431.4560.6230.8432.9947.017-5.831.837
121CC_DG10DT11:DA6DC7_EE-0.338-0.0643.029-3.53811.52129.572-2.0690.0162.82921.4816.59731.883
115CC_DT4DC5:DG12DA13_EE-0.711-0.2982.91-2.7370.94135.308-0.6140.8092.9461.5494.50235.423
117CC_DT6DA7:DT10DA11_EE0.371.2913.362-3.22122.43719.557-3.153-1.533.13849.2187.06529.854
119CC_DT8DT9:DA8DA9_EE0.791-0.1415.6544.31750.04832.541-4.804-0.3973.14458.917-5.08259.273
120CC_DT9DG10:DC7DA8_EE-0.0620.4313.417.621.53239.1310.4471.0113.3542.261-11.24239.866
122CC_DT11DC12:DG5DA6_EE0.286-0.1262.9720.3174.25635.002-0.78-0.432.947.044-0.52535.253
125CC_DT14DG15:DC2DA3_EE-0.0612.8243.4113.879-10.29747.0844.2190.3642.758-12.688-4.7848.282

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.