A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 14-Apr-2021 number of released structures: 11277
Search for released structures

NDB ID: 6L9Z  PDB ID: 6L9Z 


Base Pair Hydrogen Bonding Classification

CSV Format

Model NumberPair NumberPair NameLeontis / Westhof ClassificationSaenger Classification
11I_DA1:DT338_J120
18I_DA8:DT331_J120
19I_DA9:DT330_J120
110I_DA10:DT329_J120
111I_DA11:DT328_J120
112I_DA12:DT327_J120
113I_DA13:DT326_J120
114I_DA14:DT325_J120
115I_DA15:DT324_J120
119I_DA19:DT320_J120
131I_DA31:DT308_J120
140I_DA40:DT299_J120
141I_DA41:DT298_J120
150I_DA50:DT289_J120
152I_DA52:DT287_J120
154I_DA54:DT285_J120
160I_DA60:DT279_J120
163I_DA63:DT276_J120
170I_DA70:DT269_J120
171I_DA71:DT268_J120
172I_DA72:DT267_J120
176I_DA76:DT263_J120
180I_DA80:DT259_J120
191I_DA91:DT248_J120
1101I_DA101:DT238_J120
1102I_DA102:DT237_J120
1108I_DA108:DT231_J120
1111I_DA111:DT228_J120
1113I_DA113:DT226_J120
1114I_DA114:DT225_J120
1121I_DA121:DT218_J120
1124I_DA124:DT215_J120
1131I_DA131:DT208_J120
1135I_DA135:DT204_J120
1142I_DA142:DT197_J120
1144I_DA144:DT195_J120
1150I_DA150:DT189_J120
1152I_DA152:DT187_J120
1155I_DA155:DT184_J120
1156I_DA156:DT183_J120
1157I_DA157:DT182_J120
1158I_DA158:DT181_J120
1159I_DA159:DT180_J120
1160I_DA160:DT179_J120
1161I_DA161:DT178_J120
1162I_DA162:DT177_J120
1163I_DA163:DT176_J120
1164I_DA164:DT175_J120
1167I_DA167:DT172_J120
1170I_DA170:DT169_J120
1175I_DA175:DT164_J120
1176I_DA176:DT163_J120
1177I_DA177:DT162_J120
1178I_DA178:DT161_J120
1179I_DA179:DT160_J120
1180I_DA180:DT159_J120
1181I_DA181:DT158_J120
1182I_DA182:DT157_J120
1183I_DA183:DT156_J120
1184I_DA184:DT155_J120
1188I_DA188:DT151_J120
1200I_DA200:DT139_J120
1209I_DA209:DT130_J120
1210I_DA210:DT129_J120
1219I_DA219:DT120_J120
1221I_DA221:DT118_J120
1223I_DA223:DT116_J120
1229I_DA229:DT110_J120
1232I_DA232:DT107_J120
1239I_DA239:DT100_J120
1240I_DA240:DT99_J120
1241I_DA241:DT98_J120
1245I_DA245:DT94_J120
1249I_DA249:DT90_J120
1260I_DA260:DT79_J120
1270I_DA270:DT69_J120
1271I_DA271:DT68_J120
1277I_DA277:DT62_J120
1280I_DA280:DT59_J120
1282I_DA282:DT57_J120
1283I_DA283:DT56_J120
1290I_DA290:DT49_J120
1293I_DA293:DT46_J120
1300I_DA300:DT39_J120
1304I_DA304:DT35_J120
1311I_DA311:DT28_J120
1313I_DA313:DT26_J120
1319I_DA319:DT20_J120
1321I_DA321:DT18_J120
1324I_DA324:DT15_J120
1325I_DA325:DT14_J120
1326I_DA326:DT13_J120
1327I_DA327:DT12_J120
1328I_DA328:DT11_J120
1329I_DA329:DT10_J120
1330I_DA330:DT9_J120
1331I_DA331:DT8_J120
1337I_DA337:DT2_J120
13I_DC3:DG336_J119
15I_DC5:DG334_J119
116I_DC16:DG323_J119
118I_DC18:DG321_J119
121I_DC21:DG318_J119
122I_DC22:DG317_J119
123I_DC23:DG316_J119
128I_DC28:DG311_J119
129I_DC29:DG310_J119
134I_DC34:DG305_J119
135I_DC35:DG304_J119
137I_DC37:DG302_J119
139I_DC39:DG300_J119
147I_DC47:DG292_J119
153I_DC53:DG286_J119
156I_DC56:DG283_J119
158I_DC58:DG281_J119
162I_DC62:DG277_J119
164I_DC64:DG275_J119
165I_DC65:DG274_J119
167I_DC67:DG272_J119
173I_DC73:DG266_J119
175I_DC75:DG264_J119
177I_DC77:DG262_J119
181I_DC81:DG258_J119
183I_DC83:DG256_J119
185I_DC85:DG254_J119
189I_DC89:DG250_J119
192I_DC92:DG247_J119
193I_DC93:DG246_J119
195I_DC95:DG244_J119
1103I_DC103:DG236_J119
1104I_DC104:DG235_J119
1106I_DC106:DG233_J119
1107I_DC107:DG232_J119
1109I_DC109:DG230_J119
1116I_DC116:DG223_J119
1118I_DC118:DG221_J119
1122I_DC122:DG217_J119
1127I_DC127:DG212_J119
1129I_DC129:DG210_J119
1130I_DC130:DG209_J119
1134I_DC134:DG205_J119
1136I_DC136:DG203_J119
1145I_DC145:DG194_J119
1146I_DC146:DG193_J119
1149I_DC149:DG190_J119
1151I_DC151:DG188_J119
1166I_DC166:DG173_J119
1172I_DC172:DG167_J119
1174I_DC174:DG165_J119
1185I_DC185:DG154_J119
1187I_DC187:DG152_J119
1190I_DC190:DG149_J119
1191I_DC191:DG148_J119
1192I_DC192:DG147_J119
1197I_DC197:DG142_J119
1198I_DC198:DG141_J119
1203I_DC203:DG136_J119
1204I_DC204:DG135_J119
1206I_DC206:DG133_J119
1208I_DC208:DG131_J119
1216I_DC216:DG123_J119
1222I_DC222:DG117_J119
1225I_DC225:DG114_J119
1227I_DC227:DG112_J119
1231I_DC231:DG108_J119
1233I_DC233:DG106_J119
1234I_DC234:DG105_J119
1236I_DC236:DG103_J119
1242I_DC242:DG97_J119
1244I_DC244:DG95_J119
1246I_DC246:DG93_J119
1250I_DC250:DG89_J119
1252I_DC252:DG87_J119
1254I_DC254:DG85_J119
1258I_DC258:DG81_J119
1261I_DC261:DG78_J119
1262I_DC262:DG77_J119
1264I_DC264:DG75_J119
1272I_DC272:DG67_J119
1273I_DC273:DG66_J119
1275I_DC275:DG64_J119
1276I_DC276:DG63_J119
1278I_DC278:DG61_J119
1285I_DC285:DG54_J119
1287I_DC287:DG52_J119
1291I_DC291:DG48_J119
1296I_DC296:DG43_J119
1298I_DC298:DG41_J119
1299I_DC299:DG40_J119
1303I_DC303:DG36_J119
1305I_DC305:DG34_J119
1314I_DC314:DG25_J119
1315I_DC315:DG24_J119
1318I_DC318:DG21_J119
1320I_DC320:DG19_J119
1332I_DC332:DG7_J119
1333I_DC333:DG6_J119
1335I_DC335:DG4_J119
14I_DG4:DC335_J119
16I_DG6:DC333_J119
17I_DG7:DC332_J119
117I_DG17:DC322_J119
124I_DG24:DC315_J119
125I_DG25:DC314_J119
127I_DG27:DC312_J119
130I_DG30:DC309_J119
132I_DG32:DC307_J119
133I_DG33:DC306_J119
136I_DG36:DC303_J119
144I_DG44:DC295_J119
145I_DG45:DC294_J119
148I_DG48:DC291_J119
151I_DG51:DC288_J119
155I_DG55:DC284_J119
161I_DG61:DC278_J119
166I_DG66:DC273_J119
174I_DG74:DC265_J119
178I_DG78:DC261_J119
182I_DG82:DC257_J119
184I_DG84:DC255_J119
187I_DG87:DC252_J119
194I_DG94:DC245_J119
196I_DG96:DC243_J119
1105I_DG105:DC234_J119
1112I_DG112:DC227_J119
1115I_DG115:DC224_J119
1117I_DG117:DC222_J119
1125I_DG125:DC214_J119
1132I_DG132:DC207_J119
1133I_DG133:DC206_J119
1137I_DG137:DC202_J119
1139I_DG139:DC200_J119
1141I_DG141:DC198_J119
1143I_DG143:DC196_J119
1147I_DG147:DC192_J119
1148I_DG148:DC191_J119
1154I_DG154:DC185_J119
1165I_DG165:DC174_J119
1168I_DG168:DC171_J119
1169I_DG169:DC170_J119
1171I_DG171:DC168_J119
1173I_DG173:DC166_J119
1186I_DG186:DC153_J119
1193I_DG193:DC146_J119
1194I_DG194:DC145_J119
1196I_DG196:DC143_J119
1199I_DG199:DC140_J119
1201I_DG201:DC138_J119
1202I_DG202:DC137_J119
1205I_DG205:DC134_J119
1213I_DG213:DC126_J119
1214I_DG214:DC125_J119
1217I_DG217:DC122_J119
1220I_DG220:DC119_J119
1224I_DG224:DC115_J119
1230I_DG230:DC109_J119
1235I_DG235:DC104_J119
1243I_DG243:DC96_J119
1247I_DG247:DC92_J119
1251I_DG251:DC88_J119
1253I_DG253:DC86_J119
1256I_DG256:DC83_J119
1263I_DG263:DC76_J119
1265I_DG265:DC74_J119
1274I_DG274:DC65_J119
1281I_DG281:DC58_J119
1284I_DG284:DC55_J119
1286I_DG286:DC53_J119
1294I_DG294:DC45_J119
1301I_DG301:DC38_J119
1302I_DG302:DC37_J119
1306I_DG306:DC33_J119
1308I_DG308:DC31_J119
1310I_DG310:DC29_J119
1312I_DG312:DC27_J119
1316I_DG316:DC23_J119
1317I_DG317:DC22_J119
1323I_DG323:DC16_J119
1334I_DG334:DC5_J119
1336I_DG336:DC3_J119
12I_DT2:DA337_J120
120I_DT20:DA319_J120
126I_DT26:DA313_J120
138I_DT38:DA301_J120
142I_DT42:DA297_J120
143I_DT43:DA296_J120
146I_DT46:DA293_J120
149I_DT49:DA290_J120
157I_DT57:DA282_J120
159I_DT59:DA280_J120
168I_DT68:DA271_J120
169I_DT69:DA270_J120
179I_DT79:DA260_J120
186I_DT86:DA253_J120
188I_DT88:DA251_J120
190I_DT90:DA249_J120
197I_DT97:DA242_J120
198I_DT98:DA241_J120
199I_DT99:DA240_J120
1100I_DT100:DA239_J120
1110I_DT110:DA229_J120
1119I_DT119:DA220_J120
1120I_DT120:DA219_J120
1123I_DT123:DA216_J120
1126I_DT126:DA213_J120
1128I_DT128:DA211_J120
1138I_DT138:DA201_J120
1140I_DT140:DA199_J120
1153I_DT153:DA186_J120
1189I_DT189:DA150_J120
1195I_DT195:DA144_J120
1207I_DT207:DA132_J120
1211I_DT211:DA128_J120
1212I_DT212:DA127_J120
1215I_DT215:DA124_J120
1218I_DT218:DA121_J120
1226I_DT226:DA113_J120
1228I_DT228:DA111_J120
1237I_DT237:DA102_J120
1238I_DT238:DA101_J120
1248I_DT248:DA91_J120
1255I_DT255:DA84_J120
1257I_DT257:DA82_J120
1259I_DT259:DA80_J120
1266I_DT266:DA73_J120
1267I_DT267:DA72_J120
1268I_DT268:DA71_J120
1269I_DT269:DA70_J120
1279I_DT279:DA60_J120
1288I_DT288:DA51_J120
1289I_DT289:DA50_J120
1292I_DT292:DA47_J120
1295I_DT295:DA44_J120
1297I_DT297:DA42_J120
1307I_DT307:DA32_J120
1309I_DT309:DA30_J120
1322I_DT322:DA17_J120
1338I_DT338:DA1_J120

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)