A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 22-Jun-2022 number of released structures: 12128
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NDB ID: 6LMJ  PDB ID: 6LMJ 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
15CC_DA6DC8:DG14DT15_DD0.856-0.8573.1014.229-6.6926.636-0.175-0.7643.308-14.129-8.93227.767
17CC_DA9DA10:DT12DT13_DD-0.3490.0323.448-0.646-0.79435.5310.1750.4723.452-1.3011.05835.546
18CC_DA10DT11:DT11DT12_DD0.162-0.9093.296-0.8432.54633.704-1.973-0.4153.2164.3821.4533.807
13CC_DC3DT5:DT16DG17_DD0.7590.0493.6491.416.09149.841-0.432-0.7813.657.195-1.66650.206
16CC_DC8DA9:DT13DG14_DD0.5-0.3873.732.43513.44743.848-1.817-0.4033.49417.507-3.17145.827
116CC_DC18DA19:DT1DG2_DD-0.2631.4333.156-1.4045.13735.2621.5970.2263.3338.4212.30235.649
12CC_DG2DC3:DG17DC18_DD-0.5381.0653.084-8.1-6.24137.9932.279-0.1012.929-9.38112.17539.296
112CC_DG14DT15:DA6DC8_DD-0.727-1.2783.661-1.715-8.88231.612-0.4650.9393.901-15.93.07132.849
115CC_DG17DC18:DG2DC3_DD0.6180.993.0162.966-5.52440.9691.935-0.5852.9-7.837-4.20741.426
11CC_DT1DG2:DC18DA19_DD0.4481.2883.3582.45911.10734.610.372-0.3423.6118.075-4.00236.378
14CC_DT5DA6:DT15DT16_DD-0.3640.5382.7276.731-4.91931.2921.671.6172.486-8.923-12.20932.357
19CC_DT11DT12:DA10DT11_DD-0.608-0.7582.8824.8458.00630.273-2.631.8652.48114.888-9.0131.654
110CC_DT12DT13:DA9DA10_DD0.494-0.2893.472-0.955-2.09935.87-0.15-0.9463.469-3.4041.54835.942
111CC_DT13DG14:DC8DA9_DD-0.63-0.5593.23-5.24314.28437.385-2.3880.3362.89621.247.79640.26
113CC_DT15DT16:DT5DA6_DD0.0060.3273.023-3.966-0.61632.6060.676-0.6382.995-1.0927.03132.846
114CC_DT16DG17:DC3DT5_DD-0.822-0.1693.409-2.696.52447.544-0.7450.7883.3988.043.31548.035

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.