A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 4-Dec-2019 number of released structures: 10490
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NDB ID: 6OD5  PDB ID: 6OD5 


Base Pair Hydrogen Bonding Classification

CSV Format

Model NumberPair NumberPair NameLeontis / Westhof ClassificationSaenger Classification
12X_1CC2:DG11_Y119
110X_1CC10:DG3_Y119
11X_DA1:DT12_Y120
15X_DA5:DT8_Y120
14X_DC4:DG9_Y119
16X_DC6:DG7_Y119
13X_DG3:1CC10_Y119
17X_DG7:DC6_Y119
19X_DG9:DC4_Y119
111X_DG11:1CC2_Y119
18X_DT8:DA5_Y120
112X_DT12:DA1_Y120
113E_1CC2:DG11_F119
121E_1CC10:DG3_F119
116E_DA5:DT8_F120
115E_DC4:DG9_F119
117E_DC6:DG7_F119
114E_DG3:1CC10_F119
118E_DG7:DC6_F119
120E_DG9:DC4_F119
122E_DG11:1CC2_F119
119E_DT8:DA5_F120
123E_DT12:DA1_F120

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)