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As of 12-Aug-2020 number of released structures: 10887
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NDB ID: 6OL3  PDB ID: 6OL3 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
13C_A28:U135_C0.362-0.2930.3498.007-11.239-12.55
110C_A35:U128_C0.2130.080.187-12.773-19.682-2.305
134C_A41:U92_C-0.4570.072-0.367-24.061-9.8030.926
131C_A44:U89_C0.164-0.043-0.1415.157-12.0874.929
124C_A51:U82_C-0.003-0.1240.4373.865-0.31-11.132
121C_A54:C79_C-1.937-0.290.2345.595-8.2525.652
111C_A66:C68_C4.558-1.9670.931-23.9214.809-46.573
141C_A95:U113_C-0.194-0.2060.023.002-15.4594.987
148C_A103:U126_C-0.809-0.323-0.599-1.662-0.079-4.084
14C_C29:G134_C0.164-0.1170.07611.117-17.536-2.305
15C_C30:G133_C-0.145-0.1980.173.455-8.461-5.903
17C_C32:G131_C-0.072-0.0950.1060.243-8.9310.951
19C_C34:G129_C0.439-0.153-0.027.265-12.9211.676
132C_C43:G90_C0.002-0.098-0.2917.496-13.1442.928
127C_C48:G85_C0.268-0.0550.1382.117-9.1612.636
123C_C52:G81_C0.3980.1040.292-2.155-6.7354.415
120C_C55:G78_C-0.074-0.0920.12711.638-10.1630.879
119C_C56:G77_C-0.114-0.017-0.2618.984-12.61.587
113C_C63:G71_C0.1080.083-0.222-1.35-7.392-4.355
140C_C94:G114_C0.086-0.1820.0074.564-12.539-0.334
144C_C98:G110_C0.08-0.088-0.2035.687-7.215-0.165
149C_C104:G125_C-0.216-0.158-0.3676.078-3.8040.599
150C_C105:G124_C0.193-0.148-0.5729.7113.616-6.638
11C_G26:C137_C-0.601-0.2380.005-9.441-12.808-11.334
12C_G27:C136_C-0.58-0.1580.23-4.286-10.708-0.73
18C_G33:C130_C-0.029-0.239-0.155-2.39-12.683-2.585
138C_G37:C122_C-0.25-0.04-0.81-14.883-11.1074.473
137C_G38:C121_C-0.204-0.027-0.112-8.0464.856.068
136C_G39:C120_C-0.034-0.174-0.235-4.888-3.0492.244
129C_G46:C87_C0.0680.0670.2089.071-5.973-1.578
128C_G47:C86_C0.127-0.221-0.0842.313-8.935-3.836
126C_G49:C84_C-0.2530.09-0.055-4.18-5.3162.108
125C_G50:C83_C0.106-0.023-0.283-7.02-10.401-7.92
122C_G53:C80_C-0.225-0.092-0.536-6.152-6.273-0.067
118C_G57:C76_C1.0670.294-0.523-6.963-4.175-0.38
117C_G58:C75_C-0.028-0.169-0.03-3.833-3.657-6.634
116C_G59:U74_C-2.027-0.477-0.7830.5620.108-10.237
112C_G64:C70_C-0.077-0.2310.1583.328-1.94-4.483
143C_G97:C111_C0.002-0.114-0.051-1.281-6.675-1.546
145C_G99:C109_C-0.05-0.169-0.075-4.353-5.1480.772
146C_G100:C108_C-0.141-0.187-0.315-13.771-17.8951.417
139C_G106:A123_C-2.974-6.8031.895-57.9225.195-156.823
16C_U31:A132_C-0.038-0.039-0.07-1.14-19.9630.368
135C_U40:A119_C0.06-0.3020.0184.8-7.430.114
133C_U42:A91_C-0.152-0.1310.127-8.891-15.5222.506
130C_U45:G88_C2.258-0.54-0.1263.931-16.7253.295
115C_U61:A73_C0.133-0.024-0.166-2.069-11.0273.017
114C_U62:G72_C1.452-0.2740.055-3.405-8.140.253
142C_U96:G112_C2.682-0.57-0.0285.49-16.0592.706
147C_U101:C107_C4.53-1.086-0.239-10.361-6.524-3.972

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.