A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 11-Dec-2019 number of released structures: 10507
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NDB ID: 6OY5  PDB ID: 6OY5 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
14G_DA7:DT21_H0.975-0.460.7995.183-10.717-12.743
17G_DA10:DT18_H1.0270.125-0.20514.807-15.018-6.631
19G_DA12:DT16_H0.134-0.24-0.581-16.685-30.357-5.63
11G_DC3:DG25_H-1.2580.0-1.2773.991-25.868-12.957
12G_DC4:DA24_H-1.089-0.484-0.8221.99-40.7855.748
13G_DC6:DG22_H-0.8990.267-0.07913.783-28.6240.779
16G_DC9:DG19_H0.2490.0230.3718.381-13.6213.24
111G_DC15:G8_I-0.335-0.088-0.5384.4842.378-0.136
112G_DC16:GTP7_I0.473-0.43-0.31510.314-2.3416.476
18G_DG11:DC17_H0.6-0.1330.1310.302-38.14812.703
110G_DG13:DC15_H0.5530.3320.349-4.956-13.754-0.345
15G_DT8:DA20_H-0.514-0.070.42.754-13.454-3.544

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.