A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 11-Dec-2019 number of released structures: 10507
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NDB ID: 6OY5  PDB ID: 6OY5 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
14GG_DA7DT8:DA20DT21_HH0.285-0.3163.7024.4-4.66130.5120.430.433.712-8.736-8.24731.163
17GG_DA10DG11:DC17DT18_HH0.7230.013.7441.57115.36136.586-2.063-0.8553.523.24-2.37639.608
19GG_DA12DG13:DC15DT16_HH0.307-0.4362.909-4.2129.13833.393-1.934-1.0692.64515.4727.13134.834
11GG_DC3DC4:DA24DG25_HH0.9911.6343.988-3.4980.6445.3472.046-1.6553.9260.8294.52945.479
12GG_DC4DC6:DG22DA24_HH0.2481.1056.93-5.7648.17169.7310.345-0.6486.9717.115.01570.354
13GG_DC6DA7:DT21DG22_HH-0.1250.1993.828-13.7447.78646.467-0.46-1.0853.7099.5516.85948.937
16GG_DC9DA10:DT18DG19_HH-0.0720.3043.4857.5354.17235.652-0.1281.223.4136.694-12.0936.645
110GG_DC15DC16:GTP7G8_II0.136-1.1823.269-2.43316.51729.385-4.487-0.5952.28429.734.37933.706
18GG_DG11DA12:DT16DC17_HH-0.814-0.043.6444.044.70432.02-0.9712.2233.4778.428-7.2432.6
15GG_DT8DC9:DG19DA20_HH0.8150.2593.1270.966-2.34638.3930.672-1.1223.125-3.563-1.46838.474

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.