A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 21-Aug-2019 number of released structures: 10343
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NDB ID: 6OY6  PDB ID: 6OY6 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
15G_DA8:DT20_H-1.22-0.445-0.31-19.552-24.8080.518
18G_DA11:DT17_H0.305-0.239-0.62-1.313-42.5953.173
110G_DA13:DT15_H-0.5990.6420.387-7.007-25.451-4.096
11G_DC3:DG25_H-1.3940.243-0.08913.5241.604-9.18
12G_DC4:DG24_H-0.486-0.4870.543-11.701-28.35-1.082
14G_DC7:DG21_H1.21-0.4070.556-8.476-10.049-12.727
17G_DC10:DG18_H0.6320.036-0.9066.151-19.121-1.901
111G_DC15:G8_I0.6450.005-0.6841.3533.8813.577
112G_DC16:G7_I0.479-0.275-0.6199.717-3.7366.343
113G_DC17:G6_I0.2760.0350.0045.358-10.4168.931
19G_DG12:DC16_H1.0240.143-1.139-41.902-35.142-5.749
13G_DT5:DC22_H-0.738-0.101-1.26819.523-28.257-21.943
16G_DT9:DA19_H-0.130.2290.4880.616-12.553-5.31

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.