A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 14-Aug-2019 number of released structures: 10334
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NDB ID: 6OY6  PDB ID: 6OY6 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
15GG_DA8DT9:DA19DT20_HH-0.5190.6173.2-11.408-8.00539.0891.717-0.4683.051-11.52716.42941.407
18GG_DA11DG12:DC16DT17_HH-0.5830.1544.283-1.83411.70843.954-1.1680.5414.20915.3142.39945.447
11GG_DC3DC4:DG24DG25_HH1.1140.6514.88-2.3810.12844.3330.843-1.8014.8190.173.15344.394
12GG_DC4DT5:DC22DG24_HH0.7020.2754.585-16.264-12.11849.4731.367-2.2064.023-13.82818.5653.226
14GG_DC7DA8:DT20DG21_HH-0.0360.3563.8114.5123.12226.227-0.1781.4463.7676.785-9.80626.785
17GG_DC10DA11:DT17DG18_HH0.2880.9823.6753.21220.18829.678-1.9580.0983.61834.71-5.52335.906
110GG_DC15DC16:G7G8_II0.087-1.2393.0840.918.51823.754-5.512-0.0151.69938.369-1.86530.051
111GG_DC16DC17:G6G7_II0.57-2.3193.213-4.84817.85730.367-5.877-1.4971.54830.7658.35235.447
19GG_DG12DA13:DT15DC16_HH0.346-0.5182.202-6.8092.18420.665-1.92-2.6371.9255.86618.28921.854
13GG_DT5DC7:DG21DC22_HH-1.19-0.5825.8032.4733.2866.319-0.7621.265.732.995-2.25866.432
16GG_DT9DC10:DG18DA19_HH0.702-0.1393.15111.7093.81736.67-0.6790.3773.195.867-17.99838.615

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.