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As of 4-Dec-2019 number of released structures: 10490
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NDB ID: 6P0S  PDB ID: 6P0S 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11C_DA1:DT27_D0.223-0.1650.5439.94-19.843.613
12C_DA2:DT26_D0.301-0.0220.4072.88-19.742-0.503
19C_DA9:DT19_D-0.213-0.080.311-9.349-17.6177.014
111C_DA11:DT17_D-0.163-0.0030.19313.05-18.46612.908
112C_DA12:DT16_D0.025-0.1120.0097.044-16.6023.09
113C_DA13:DT15_D-0.11-0.0770.0225.368-22.067-0.68
114C_DA14:DT14_D0.4730.01-0.224-3.253-18.0564.467
115C_DA15:DT13_D-0.138-0.1-0.225-3.501-21.4450.696
116C_DA16:DT12_D-0.007-0.210.2927.831-16.648-0.723
118C_DA18:DT10_D-0.077-0.1240.1566.773-7.511-4.33
120C_DA20:DT8_D0.270.0040.1460.811-15.7387.749
123C_DA23:DT5_D0.128-0.1650.4539.637-11.4680.282
125C_DA25:DT3_D0.263-0.0360.069-9.76-15.139.88
18C_DC8:DG20_D0.522-0.2590.0121.186-7.615-1.252
117C_DC17:DG11_D0.732-0.2470.253-3.399-13.3863.187
121C_DC21:DG7_D0.318-0.1770.035.212-16.4660.015
124C_DC24:DG4_D0.476-0.249-0.0699.997-13.222-1.19
17C_DG7:DC21_D-0.634-0.231-0.058-5.151-8.5810.018
119C_DG19:DC9_D-0.161-0.1140.3378.79-15.9480.178
13C_DT3:DA25_D-0.110.0140.65-4.267-18.6621.723
14C_DT4:DA24_D-0.44-0.0140.254-3.63-22.2564.712
15C_DT5:DA23_D-0.3330.0040.128-3.471-23.4226.559
16C_DT6:DA22_D0.411-0.160.592-10.533-16.5533.757
110C_DT10:DA18_D0.22-0.0450.441-5.103-11.5636.586
122C_DT22:DA6_D-0.038-0.161-0.274.942-13.406-2.035
126C_DT26:DA2_D-0.0540.1920.181-8.349-16.3149.504
127C_DT27:DA1_D-0.1860.0180.129-14.17-18.7958.366

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.