A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 21-Aug-2019 number of released structures: 10343
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NDB ID: 6P0S  PDB ID: 6P0S 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
11CC_DA1DA2:DT26DT27_DD-0.342-0.3933.4030.759-5.97738.5310.1690.6093.417-8.99-1.14138.981
12CC_DA2DT3:DA25DT26_DD0.341-0.7613.423-0.41-1.82332.921-1.014-0.6733.455-3.2140.72232.972
19CC_DA9DT10:DA18DT19_DD-0.35-0.63.243-1.0122.82730.848-1.660.4633.1865.2991.89830.99
111CC_DA11DA12:DT16DT17_DD-0.758-0.0193.379-2.0171.75535.412-0.2980.9373.4112.8813.3135.509
112CC_DA12DA13:DT15DT16_DD-0.4830.0393.252-1.881-5.4537.5930.7520.5023.235-8.3972.89938.017
113CC_DA13DA14:DT14DT15_DD0.252-0.1093.4751.929-3.2542.6430.196-0.143.481-4.458-2.64642.802
114CC_DA14DA15:DT13DT14_DD-0.061-0.3093.2030.541-1.04233.334-0.3690.1943.21-1.815-0.94333.355
115CC_DA15DA16:DT12DT13_DD0.243-0.1592.964-2.218-6.54635.8190.57-0.6682.927-10.5223.56636.458
116CC_DA16DC17:DG11DT12_DD0.839-0.9023.60.136-3.43239.394-0.885-1.2233.665-5.079-0.20239.538
118CC_DA18DG19:DC9DT10_DD0.925-1.2033.261-3.4084.50329.679-3.183-2.4372.9298.6926.57830.199
120CC_DA20DC21:DG7DT8_DD-0.16-0.5513.1420.1266.16327.078-2.5480.3622.94612.951-0.26427.758
123CC_DA23DC24:DG4DT5_DD0.472-0.693.384.2620.05832.041-1.25-0.0613.4110.105-7.67932.316
125CC_DA25DT26:DA2DT3_DD-0.363-0.4873.3021.174-4.85532.25-0.0070.8533.323-8.675-2.09832.625
18CC_DC8DA9:DT19DG20_DD0.315-0.313.405-2.21912.99233.172-2.44-0.8453.04821.723.7135.626
117CC_DC17DA18:DT10DG11_DD-0.584-0.3863.072.6418.95829.715-2.2891.5522.77716.948-4.99731.116
121CC_DC21DT22:DA6DG7_DD-0.624-0.1553.3012.3534.84329.921-1.2661.6613.189.285-4.51130.391
124CC_DC24DA25:DT3DG4_DD0.476-0.773.5431.0048.54538.686-2.2-0.5773.31712.708-1.49239.596
17CC_DG7DC8:DG20DC21_DD0.144-0.553.166-0.6856.46429.119-2.348-0.4162.97312.6591.34229.821
119CC_DG19DA20:DT8DC9_DD-0.516-0.8113.4370.4664.22236.762-1.8670.8773.326.668-0.73636.998
13CC_DT3DT4:DA24DA25_DD-0.102-0.5593.1083.337-5.37732.493-0.1070.7223.132-9.497-5.89433.088
14CC_DT4DT5:DA23DA24_DD-0.051-0.2683.1990.801-4.80937.420.1970.1813.206-7.457-1.24237.725
15CC_DT5DT6:DA22DA23_DD0.2310.1323.512-3.4381.6541.408-0.002-0.7163.4862.3284.8541.575
16CC_DT6DG7:DC21DA22_DD-0.0880.5063.162.5142.63532.3690.4560.5823.1754.708-4.49232.568
110CC_DT10DA11:DT17DA18_DD0.2870.6532.9254.2487.98633.704-0.030.1163.0113.474-7.16834.863
122CC_DT22DA23:DT5DA6_DD0.6040.3923.242-4.0525.9738.927-0.115-1.3633.1898.8656.01839.564
126CC_DT26DT27:DA1DA2_DD-0.043-0.1453.371.842-2.75435.1250.1820.3523.364-4.552-3.04335.276

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.