A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 21-Aug-2019 number of released structures: 10343
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NDB ID: 6P0T  PDB ID: 6P0T 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
11CC_DA1DA2:DT26DT27_DD-0.351-0.2293.153-2.283-2.56729.4240.0780.2193.179-5.0324.47529.619
12CC_DA2DT3:DA25DT26_DD1.027-0.0073.0282.869-10.3935.0691.33-1.2632.982-16.76-4.62736.638
115CC_DA15DA16:DT12DT13_DD-0.72-0.53.132-1.314-8.50933.2170.4631.0193.184-14.5812.25234.284
116CC_DA16DC17:DG11DT12_DD0.571-1.3343.572-2.284-2.58532.539-1.877-1.4473.617-4.5974.06232.717
118CC_DA18DG19:DC9DT10_DD0.686-1.4543.471-0.712-3.12727.157-2.235-1.6443.593-6.631.5127.343
120CC_DA20DC21:DG7DT8_DD-0.183-0.3042.9382.57510.11631.354-2.0530.7092.6918.101-4.60833.005
123CC_DA23DC24:DG4DT5_DD0.586-0.9863.5380.4462.24234.827-2.008-0.9043.4773.741-0.74334.899
125CC_DA25DT26:DA2DT3_DD-0.797-0.6883.353-2.803-3.70732.208-0.5490.9113.464-6.6395.0232.533
117CC_DC17DA18:DT10DG11_DD-0.728-0.352.88-1.6498.70938.192-1.4350.9142.76513.0952.4839.17
121CC_DC21DT22:DA6DG7_DD-0.661-0.233.466-4.0336.76426.406-2.2510.3353.36614.4068.58927.535
124CC_DC24DA25:DT3DG4_DD-0.108-0.8343.1874.6192.93738.162-1.6130.7153.0834.464-7.02138.538
14CC_DG4DT5:DA23DC24_DD-0.043-0.5053.003-3.122-0.62937.228-0.711-0.3113.005-0.9844.87937.359
17CC_DG7DT8:DA20DC21_DD0.271-0.4953.0211.6198.21634.448-1.911-0.2292.84113.625-2.68435.421
19CC_DG9DT10:DA18DC19_DD-0.303-0.8393.326-6.7524.89338.494-1.833-0.363.2067.31810.09739.354
119CC_DG19DA20:DT8DC9_DD-0.391-0.7953.7241.5210.70634.611-1.4580.9213.6881.185-2.55534.65
13CC_DT3DG4:DC24DA25_DD-0.594-0.363.9571.1145.99837.222-1.4891.0923.8369.32-1.73137.701
15CC_DT5DT6:DA22DA23_DD-0.253-0.3183.697-3.56-2.36535.69-0.132-0.1673.717-3.8415.78335.937
16CC_DT6DG7:DC21DA22_DD0.7540.5263.1741.305-2.75631.6041.452-1.1463.146-5.046-2.38831.747
18CC_DT8DG9:DC19DA20_DD-0.125-0.8693.754.3887.15523.319-4.4251.7623.26517.011-10.43124.764
110CC_DT10DT11:DA17DA18_DD0.411-0.6392.725-0.1525.60632.779-1.884-0.7392.5829.8430.26733.243
111CC_DT11DT12:DA16DA17_DD-0.531-0.2873.0444.527-9.04835.7020.681.4012.941-14.405-7.20837.063
112CC_DT12DT13:DA15DA16_DD-0.408-0.2463.348-2.808-1.22238.89-0.2160.2633.374-1.8324.20939.006
113CC_DT13DT14:DA14DA15_DD-0.274-0.0673.356-1.472-7.53737.420.8780.2283.315-11.5992.26538.173
114CC_DT14DA15:DT13DA14_DD1.0160.5943.196-1.401-8.56242.3791.609-1.5112.993-11.6971.91343.218
122CC_DT22DA23:DT5DA6_DD0.1580.3222.903-6.060.43438.8140.433-0.8742.850.6489.05139.268
126CC_DT26DT27:DA1DA2_DD-0.035-0.333.358-1.48-4.87637.880.13-0.1383.372-7.472.26738.208

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.