A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 23-Sep-2020 number of released structures: 10967
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NDB ID: 6PL8  PDB ID: 6PL8 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11T_DA5:DT8_P-0.02-0.024-0.171-9.519-7.2396.496
14T_DA8:DT5_P0.201-0.002-0.14.5610.2452.968
15T_DC9:DG4_P0.348-0.183-0.38514.836-3.6363.022
17T_DC11:DG2_P0.1170.0110.197-4.617-0.031-0.479
13T_DG7:DC6_P-0.356-0.214-0.306-10.3-3.0-0.015
16T_DG10:DC3_P-0.373-0.2670.1293.79-0.0484.44
12T_DT6:DA7_P0.112-0.0940.1280.927-6.2656.407
18T_DT12:DA1_P0.083-0.421-0.20312.945-2.2979.395

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.