A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 12-Aug-2020 number of released structures: 10887
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NDB ID: 6QCV  PDB ID: 6QCV 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11M_A8:U21_R-3.221.1750.037-39.60543.802-171.14
12M_A11:U20_R-0.374-0.1580.886-7.4971.416-1.256
14M_A13:U18_R-0.321-0.0910.79714.726-12.8096.147
15M_G14:C17_R-0.0120.0480.62712.192-17.1062.541
13M_U12:A19_R-0.232-0.0790.9461.915-8.9272.417
16R_C6:G14_V0.223-0.0810.1222.725-10.313-0.256
18R_C8:G12_V0.458-0.1840.1670.743-19.9420.226
17R_U7:A13_V0.0460.020.1271.786-24.847.859
19R_U9:A11_V-0.284-0.0220.3475.684-8.4817.306
110V_A1:A10_V-6.502-4.7881.201-4.334-7.674-12.931
113V_A4:A7_V6.353-0.769-1.26317.686-2.1444.517
111V_G2:C9_V-0.470.058-0.301-0.209-9.652.496
112V_U3:A8_V0.2060.091-0.3895.726-12.4534.307

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.