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As of 21-Aug-2019 number of released structures: 10343
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NDB ID: 6QHD  PDB ID: 6QHD 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11C_DA1002:DT1018_D-0.5770.0090.0857.179-5.2212.035
13C_DA1004:DT1016_D0.486-0.1040.3930.566-16.4388.666
17C_DA1008:DT1012_D-0.159-0.423-0.057-13.266-9.817-1.591
112C_DA1013:DT1007_D0.421-0.283-0.0731.575-20.9775.399
113C_DA1014:DT1006_D-0.073-0.0760.3711.599-13.0624.212
114C_DA1015:DT1005_D0.181-0.0210.317-0.065-11.9883.325
18C_DC1009:DG1011_D-0.085-0.157-0.046-4.326-0.1060.981
117C_DC1018:DG1002_D0.6730.39-0.201-1.713-6.87118.43
12C_DG1003:DC1017_D-0.062-0.070.2333.056-14.1828.928
19C_DG1010:DC1010_D0.184-0.320.091-1.844-13.5611.338
110C_DG1011:DC1009_D0.043-0.133-0.0695.4810.6492.498
111C_DG1012:DC1008_D0.682-0.0760.10812.241-8.4163.856
116C_DG1017:DC1003_D0.247-0.0880.038-4.786-13.80811.119
14C_DT1005:DA1015_D-0.1260.0840.2632.185-14.2925.63
15C_DT1006:DA1014_D-0.0150.0060.653-1.822-14.4845.007
16C_DT1007:DA1013_D-0.553-0.2450.014-0.067-22.0844.712
115C_DT1016:DA1004_D-0.281-0.1060.3463.111-9.0144.879

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.