A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 5-Aug-2020 number of released structures: 10886
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NDB ID: 6QIR  PDB ID: 6QIR 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
12A_C2:G7_B0.229-0.202-0.1221.154-17.04-0.325
14A_C8:G1_B0.284-0.174-0.075.556-5.784-0.009
11A_G1:C8_B-0.333-0.047-0.09-9.914-12.6530.642
13A_G7:C2_B-0.243-0.12-0.018-0.754-10.1810.669
16B_C5:C5_C-1.91-1.4160.019-3.262-16.561-178.996
15B_G4:G4_C-1.149-1.5970.0445.984-0.158179.321
18C_C2:G7_D0.296-0.0480.232-1.302-14.0483.151
110C_C8:G1_D0.33-0.188-0.0899.008-8.181-0.69
17C_G1:C8_D-0.24-0.0340.238-3.755-10.9140.986
19C_G7:C2_D-0.288-0.1250.1093.614-15.1220.987

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.