A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 8-Jul-2020 number of released structures: 10846
Search for released structures

NDB ID: 6QWF  PDB ID: 6QWF 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
14CC_DA4DG5:DC26DT27_DD0.458-0.6083.412-0.1781.81928.666-1.649-0.9653.3653.670.3628.723
18CC_DA8DT9:DA22DT23_DD-0.34-0.9883.538-0.466-2.91133.273-1.1910.5073.613-5.0720.81233.4
111CC_DA11DA12:DT19DT20_DD0.2290.1073.1821.6211.66436.832-0.051-0.1483.1912.631-2.56236.903
112CC_DA12DC13:DG18DT19_DD-0.108-0.333.0824.571.731.487-0.8920.9783.0163.109-8.35831.853
114CC_DA14DT15:DA16DT17_DD-0.192-0.8663.171-2.687-3.6732.721-0.91-0.1123.252-6.4744.74133.027
121CC_DA21DA22:DT9DT10_DD-0.399-0.3872.926-2.1160.38133.319-0.7310.382.9410.6643.68633.386
122CC_DA22DC23:DG8DT9_DD-0.037-0.9323.627-0.8951.77133.884-1.91-0.0953.5753.0351.53333.94
125CC_DA25DC26:DG5DT6_DD1.075-0.7313.063-0.5321.16531.766-1.533-2.0533.0172.1270.97231.791
128CC_DA28DT29:DA2DT3_DD-0.138-0.5933.3370.5961.10630.118-1.370.3893.312.127-1.14730.144
17CC_DC7DA8:DT23DG24_DD-0.1-0.2593.198-4.3626.26634.606-1.323-0.4593.09510.3777.22435.413
113CC_DC13DA14:DT17DG18_DD0.026-0.4453.564-0.2759.76933.446-2.339-0.0893.30716.5410.46634.806
123CC_DC23DG24:DC7DG8_DD0.423-0.2063.1474.3224.27333.446-1.013-0.0563.1267.349-7.43333.978
126CC_DC26DG27:DC4DG5_DD-0.4880.1153.318-3.2273.25335.991-0.2810.3223.3455.2385.19736.272
13CC_DG3DA4:DT27DC28_DD-1.25-0.2293.157-3.4883.62735.744-0.8721.5353.2225.8745.64836.085
15CC_DG5DG6:DC25DC26_DD-0.54-0.3493.181.5920.93635.988-0.6931.0923.1441.514-2.57536.034
16CC_DG6DC7:DG24DC25_DD0.378-0.4883.2770.6922.3536.092-1.117-0.5123.2463.787-1.11636.172
118CC_DG18DT19:DA12DC13_DD-0.201-0.4533.226-1.9083.10533.869-1.2580.0453.185.313.26334.059
124CC_DG24DA25:DT6DC7_DD-0.844-0.2623.331-0.1293.22738.062-0.8131.2733.3014.9370.19838.194
127CC_DG27DA28:DT3DC4_DD0.308-0.4023.3592.9012.86332.043-1.243-0.0273.3265.16-5.2332.294
11CC_DT1DT2:DA29DA30_DD-0.197-0.4062.933.1156.44325.558-2.381.1522.70614.212-6.87126.525
12CC_DT2DG3:DC28DA29_DD0.5130.6673.256-0.7863.63542.4110.551-0.7863.295.0141.08442.566
19CC_DT9DT10:DA21DA22_DD0.334-0.6692.9142.8411.69632.183-1.468-0.1532.8943.049-5.10832.348
110CC_DT10DA11:DT20DA21_DD-0.103-0.6043.23-0.0924.16831.945-1.8130.173.1287.5320.16632.209
115CC_DT15DT16:DA15DA16_DD0.186-0.6563.20.361-7.85635.9190.031-0.2463.268-12.554-0.57736.742
116CC_DT16DT17:DA14DA15_DD0.342-0.5653.1481.896-3.96436.198-0.368-0.2913.203-6.351-3.03836.455
117CC_DT17DG18:DC13DA14_DD0.065-0.3383.398-2.6394.72437.302-1.155-0.4543.327.3374.137.679
119CC_DT19DT20:DA11DA12_DD-0.268-0.1433.1081.1072.55433.731-0.6360.633.0794.392-1.90333.842
120CC_DT20DA21:DT10DA11_DD0.102-0.7153.2841.3074.80431.128-2.2010.0533.1438.881-2.41531.514
129CC_DT29DA30:DT1DA2_DD0.2340.4163.04-1.215.61337.794-0.027-0.5013.068.6051.85638.212

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.