A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 13-Nov-2019 number of released structures: 10455
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NDB ID: 6S16  PDB ID: 6S16 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
12C_DA2:DT32_F-0.227-0.0120.71311.086-13.7698.458
13C_DA3:DT31_F-0.028-0.030.3829.61-25.469.043
113C_DA13:DT21_C0.408-0.28-0.4431.679-14.417-3.154
121C_DA30:DT4_D0.4370.0270.4119.317-24.8522.131
123C_DA32:DT2_D-0.129-0.1830.0178.885-17.4130.888
11C_DC1:DG33_F-0.9030.9580.968-17.314-15.59126.979
15C_DC5:DG29_F1.7610.3240.623-9.858-31.30423.965
18C_DC8:DG26_F0.0910.1120.03210.161-4.752-2.349
114C_DC14:DG20_C-0.025-0.013-0.10816.234-16.3185.63
115C_DC15:DG19_C-0.320.055-0.2963.976-1.225.233
117C_DC26:DG8_D-0.0850.0670.534-13.775-1.310.294
120C_DC29:DG5_D-0.0050.2160.17319.765-33.49410.913
16C_DG6:DC28_F0.4820.0170.4182.986-11.8213.024
17C_DG7:DC27_F0.3080.2930.46210.36-9.3011.012
112C_DG12:DC22_C-0.527-0.155-0.757-7.438-2.8023.199
118C_DG27:DC7_D0.1810.8620.227-4.219-17.35912.376
119C_DG28:DC6_D0.8740.2950.012-1.712-17.755-3.486
122C_DG31:DC3_D-0.2470.0610.1837.738-19.2763.168
14C_DT4:DA30_F0.487-0.303-0.2421.237-21.9554.643
19C_DT9:DA25_F0.5120.054-0.41614.451-11.7371.176
110C_DT10:DA24_C-0.070.1720.954-39.385-7.92-0.342
111C_DT11:DA23_C-0.7730.1920.247-22.046-2.876-0.99
116C_DT25:DA9_D-1.038-0.0040.706-8.699-37.5166.524
126D_DC12:DG22_F1.123-1.026-1.898-13.293-8.31-1.397
124D_DT10:DA24_F-1.4090.0010.435-33.619-13.57210.885
125D_DT11:DA23_F-0.344-0.485-0.196-16.746-36.9430.107

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.