A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 23-Sep-2020 number of released structures: 10967
Search for released structures

NDB ID: 6UBU  PDB ID: 6UBU 


Base Pair Hydrogen Bonding Classification

CSV Format

Model NumberPair NumberPair NameLeontis / Westhof ClassificationSaenger Classification
13B_A17:U79_B120
15B_A19:U77_B120
17B_A21:U75_B120
118B_A33:A66_B45
120B_A35:A64_B45
116B_A40:U30_B120
112B_A44:C26_B10
111B_A45:U25_B120
14B_C18:G78_B119
117B_C39:G31_B119
115B_C41:G29_B119
113B_C43:G27_B119
126B_C70:G56_B119
127B_C71:G55_B119
11B_G15:C81_B119
12B_G16:C80_B119
121B_G37:C61_B119
122B_G38:C60_B119
114B_G42:C28_B119
110B_G46:C53_B119
124B_G68:C58_B119
128B_G72:C54_B119
16B_U20:A76_B120
19B_U22:A52_B120
119B_U34:A65_B424
18B_U47:U51_B00
123B_U67:A59_B120
125B_U69:G57_B128

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)