A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 23-Sep-2020 number of released structures: 10967
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NDB ID: 6UKE  PDB ID: 6UKE 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
14AA_DA4DA5:DT95IU10_BB0.296-0.2463.021-2.8141.11731.191-0.649-1.0362.9732.0725.21931.334
15AA_DA5DG6:DC8DT9_BB-0.181-0.1513.260.4861.5834.178-0.5040.3843.2482.686-0.82634.217
110AA_DA10DA11:5IU3DT4_BB-0.15-0.1533.407-3.088-0.42439.082-0.176-0.1613.41-0.6334.60739.201
111AA_DA11DC12:DG25IU3_BB0.288-0.0953.4561.8450.50334.53-0.241-0.1843.4640.846-3.10534.581
12AA_DC2DC3:DG11DG12_BB-0.7050.033.2061.0747.37431.672-1.2091.4433.10813.283-1.93532.515
13AA_DC3DA4:5IU10DG11_BB-0.0290.5923.241-0.8366.9637.2190.013-0.0633.29510.7871.29637.85
17AA_DC7DG8:DC6DG7_BB0.55-0.1953.8823.5019.5842.253-1.368-0.343.78413.063-4.77443.412
19AA_DC9DA10:DT4DG5_BB2.304-0.7434.1714.972-21.1798.3697.6161.6063.134-59.134-41.80527.232
112AA_DC12DG13:DC1DG2_BB0.3061.8473.688-0.22-2.78643.8822.76-0.4323.569-3.7240.29443.966
16AA_DG6DC7:DG7DC8_BB-0.292-0.4783.5411.628-1.02936.381-0.610.7123.537-1.647-2.60536.43
18AA_DG8DC9:DG5DC6_BB0.8410.3423.422-4.409-7.57734.5361.685-2.0313.151-12.5147.28235.599
11AA_DT1DC2:DG12DA13_BB0.139-0.3913.1113.525-2.88533.307-0.2230.3123.131-5.005-6.11433.608

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.