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As of 20-Feb-2020 number of released structures: 10626
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NDB ID: 6UKI  PDB ID: 6UKI 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
114A_DA14:DT1_B-0.001-0.183-0.1340.811-10.3282.528
11A_DC1:DG14_B0.195-0.2880.016-6.518-19.4420.791
17A_DC7:DG8_B0.477-0.133-0.216.192-8.302-3.53
19A_DC9:DG6_B0.548-0.033-0.565-15.85836.694.155
13A_DG3:DC12_B0.156-0.225-0.287-10.434-9.976-0.65
16A_DG6:DC9_B-0.3630.0950.57812.369-12.1491.855
18A_DG8:DC7_B-0.596-0.036-0.027-25.675-20.812.536
112A_DG12:DC3_B0.341-0.0640.58713.588-8.6846.2
113A_DG13:DC2_B0.124-0.0050.2597.522-12.6478.301
12A_DT2:DA13_B-0.133-0.2250.073-10.79-7.095-2.673
14A_DT4:DA11_B-0.524-0.1560.239-8.235-6.797-2.709
15A_DT5:DA10_B-0.574-0.2580.101-1.314-4.707-7.172
110A_DT10:DA5_B-0.371-0.114-0.0899.985-7.616-3.403
111A_DT11:DA4_B-0.307-0.1990.25614.439-11.8710.032
128D_DA14:DT1_E0.172-0.1270.90219.378-6.9832.647
115D_DC1:DG14_E-0.039-0.4180.753-8.706-15.5862.874
121D_DC7:DG8_E0.553-0.1910.014-1.529-2.905-1.661
123D_DC9:DG6_E0.347-0.255-0.672-7.73933.4262.056
117D_DG3:DC12_E-0.2370.0530.038-13.314-12.0416.084
120D_DG6:DC9_E-0.275-0.040.2354.493-13.2023.476
122D_DG8:DC7_E-0.420.0220.06-27.299-19.9193.973
126D_DG12:DC3_E0.314-0.0730.5613.642-9.8493.512
127D_DG13:DC2_E-0.0250.1520.3959.572-19.3466.672
116D_DT2:DA13_E-0.259-0.1220.468-10.998-11.0020.09
118D_DT4:DA11_E-0.625-0.1650.523-15.308-9.906-5.513
119D_DT5:DA10_E-0.3880.068-0.074-5.181-6.787-2.423
124D_DT10:DA5_E-0.393-0.1050.2448.82-9.895-2.194
125D_DT11:DA4_E-0.239-0.1590.19510.629-13.602-0.958

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.