A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 5-Aug-2020 number of released structures: 10886
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NDB ID: 6USR  PDB ID: 6USR 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
15E_DA5:DT12_F-0.001-0.2320.424-0.145-4.5211.04
110E_DA10:U7_F-0.073-0.1170.380.0834.584.516
115E_DA15:U2_F-0.5370.39-0.23713.6625.539-0.516
14E_DC4:G13_F0.112-0.1240.386-5.681-5.3050.294
19E_DC9:G8_F0.203-0.1790.095-2.731-9.2442.763
114E_DC14:G3_F0.149-0.158-0.156-5.5673.772-1.51
11E_DG1:DC16_F-0.203-0.1260.1674.223-4.244-1.316
12E_DG2:C15_F-0.106-0.1670.322-0.384-10.136-4.993
16E_DG6:DC11_F-0.243-0.1740.1551.344-6.0012.455
17E_DG7:C10_F-0.208-0.136-0.367-7.057-12.442.607
111E_DG11:C6_F-0.234-0.1380.39810.5773.7423.063
112E_DG12:C5_F-0.226-0.152-0.226-2.65-10.7581.214
13E_DT3:A14_F-0.149-0.240.431-6.244-14.319-2.815
18E_DT8:A9_F0.841-0.1890.09-3.029-16.06810.629
113E_DT13:A4_F-0.097-0.135-0.027-7.378-7.267-2.935

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.