A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 13-Oct-2021 number of released structures: 11721
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NDB ID: 6VF5  PDB ID: 6VF5 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
15TT_DA7DC8:DG2DT3_PP-0.454-1.3453.2871.9313.97736.652-2.6510.9743.1026.296-3.05736.909
11TT_DC1DG2:DC3DG4_DD-0.160.7383.1942.2253.59534.10.6940.6143.2366.1-3.77634.354
16TT_DC8DG9:DC1DG2_PP-0.791-1.3223.504-4.4615.93435.115-3.0440.6113.3179.7027.29435.867
12TT_DG2DG3:DC2DC3_DD0.276-0.1763.417-1.3183.7935.479-0.857-0.6483.3696.1942.15435.698
13TT_DG3DC4:DG1DC2_DD0.4320.0153.0294.152.84726.109-0.670.0823.0446.228-9.07926.581
14TT_DT6DA7:DT3DA4_PP0.066-1.2753.157-4.8733.18129.17-3.114-1.0932.9546.2379.55729.732

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.