A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 27-Oct-2021 number of released structures: 11731
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NDB ID: 6VFB  PDB ID: 6VFB 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
16T_DA7:DT3_P0.254-0.1650.16510.958-11.7371.54
11T_DC1:DG4_D0.208-0.1070.541-15.483-12.771-5.329
14T_DC4:DG1_D0.261-0.118-0.21512.5690.177-1.419
17T_DC8:DG2_P0.267-0.134-0.01215.826-18.6020.435
12T_DG2:DC3_D-0.249-0.130.036-1.902-4.499-2.172
13T_DG3:DC2_D-0.188-0.1510.078-0.232-6.606-1.902
18T_DG9:DC1_P-0.169-0.1760.183-1.039-12.902-1.461
15T_DT6:DA4_P0.254-0.332-0.249-15.7245.198-178.141

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.