A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 27-Oct-2021 number of released structures: 11731
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NDB ID: 6VFB  PDB ID: 6VFB 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
15TT_DA7DC8:DG2DT3_PP-0.543-0.833.261-0.1533.74535.02-1.9210.8753.166.2010.25435.214
11TT_DC1DG2:DC3DG4_DD0.4770.5893.0675.9912.97135.8380.5480.0343.144.777-9.63336.436
16TT_DC8DG9:DC1DG2_PP-0.692-0.9623.532-5.1410.28437.184-2.770.3783.22815.6747.83438.861
12TT_DG2DG3:DC2DC3_DD-0.668-0.1843.302-3.6014.53337.247-0.8820.5593.3067.0465.59637.678
13TT_DG3DC4:DG1DC2_DD0.2680.1853.0362.8861.2926.9510.0910.1083.0522.756-6.16527.132
14TT_DT6DA7:DT3DA4_PP-0.6140.6243.001-4.9644.336-69.604-0.686-0.6972.919-3.79-4.339-69.876

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.