A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 22-Jun-2022 number of released structures: 12128
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NDB ID: 6VGD  PDB ID: 6VGD 


Base Pair Hydrogen Bonding Classification

CSV Format

Model NumberPair NumberPair NameLeontis / Westhof ClassificationSaenger Classification
12B_DA2:DT16_C120
14B_DA4:DT14_C120
11B_DC1:DG17_C119
112B_DC13:DG5_C00
115B_DC16:DG2_C119
13B_DG3:DC15_C119
15B_DG5:DC13_C119
16B_DG6:DC12_C119
18B_DG9:DC9_C119
110B_DG11:DC7_C119
111B_DG12:DC6_C119
17B_DT8:DA10_C120
19B_DT10:DA8_C120
113B_DT14:DA4_C120
114B_DT15:DA3_C120

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)