A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 5-Aug-2020 number of released structures: 10886
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NDB ID: 6VMY  PDB ID: 6VMY 


Base Pair Hydrogen Bonding Classification

CSV Format

Model NumberPair NumberPair NameLeontis / Westhof ClassificationSaenger Classification
15A_A206:U319_A120
16A_A207:U318_A120
17A_A208:U317_A120
19A_A210:U315_A120
117A_A228:G224_A911
118A_A229:U223_A120
121A_A231:C220_A425
113A_A243:U311_A120
133A_A249:U264_A10
139A_A255:A282_A21
140A_A276:A306_A10
14A_C205:G320_A119
119A_C230:G222_A119
123A_C233:G218_A119
124A_C234:G217_A119
127A_C237:G214_A119
134A_C250:G263_A119
135A_C251:G262_A119
129A_C274:G268_A119
130A_C275:G267_A119
141A_C277:G304_A119
149A_C287:G293_A119
150A_C288:G291_A00
132A_C301:G265_A119
152A_C326:G348_A119
153A_C328:U347_A00
156A_C334:G341_A00
12A_G203:U322_A128
110A_G211:C314_A119
111A_G212:C313_A119
122A_G232:U219_A128
125A_G235:C216_A119
126A_G236:C215_A119
114A_G244:C310_A119
115A_G245:C309_A119
116A_G246:A308_A18
136A_G252:C261_A119
137A_G253:C260_A119
143A_G279:C302_A119
147A_G285:C295_A119
148A_G286:C294_A119
131A_G300:C266_A119
120A_G305:C221_A119
151A_G325:A349_A18
11A_GTP202:C323_A119
13A_U204:A321_A120
18A_U209:G316_A128
112A_U213:G312_A128
128A_U238:A242_A424
138A_U254:A257_A323
142A_U278:A303_A120
144A_U280:A299_A424
145A_U283:A297_A120
146A_U284:A296_A120
154A_U332:A344_A10
155A_U333:A342_A120

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)