A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 3-Mar-2021 number of released structures: 11234
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NDB ID: 6XT7  PDB ID: 6XT7 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
12A_DG1001:DG1019_A-1.731-3.370.228-10.62612.51289.557
15A_DG1006:DG1024_A1.526-3.4110.0490.771.771-89.038
13A_DG1010:DG1018_A1.5633.383-0.1332.3335.961-89.605
14A_DG1016:DG1025_A-1.6573.402-0.058-6.721-17.1591.659
11A_DT1003:DT1021_A2.492-1.6740.01231.058-6.8868.402
17B_DG1001:DG1019_B-1.777-3.3570.25-13.59612.77888.323
18B_DG1010:DG1018_B1.683.3180.2311.8656.177-88.558
16B_DT1003:DT1021_B2.476-1.720.13832.225-6.2128.302
110C_DG1001:DG1019_C-1.751-3.3720.386-9.83911.95590.356
113C_DG1006:DG1024_C1.543-3.304-0.030.828-0.589-88.888
111C_DG1010:DG1018_C1.5893.468-0.2024.3425.297-89.123
112C_DG1016:DG1025_C-1.5093.4740.001-7.248-20.11292.442
19C_DT1003:DT1021_C2.436-1.7250.15628.86-7.2748.293
118D_DG1006:DG1024_D-1.509-3.526-0.014-1.282-1.888.417
116D_DG1010:DG1018_D1.5343.446-0.1622.9964.853-90.566
117D_DG1011:DG1017_D1.5313.62-0.3063.252-5.454-88.417
115D_DG1019:DG1022_D-1.655-3.458-0.0976.2249.48690.661
119D_DG1023:DG1005_D1.5493.456-0.233-1.176-11.96-88.828
114D_DT1003:DT1021_D2.462-1.6980.22229.736-8.2377.718

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.