6XT7: Base Pair Morphology Step Parameters

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As of 3-Mar-2021 number of released structures: 11234

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NDB ID: 6XT7 PDB ID: 6XT7

Base Pair Morphology Step Parameters

CSV Format

Model Number	Step Number	Step Name	Shift	Slide	Rise	Tilt	Roll	Twist	X-Displacement	Y-Displacement	Helical Rise	Inclination	Tip	Helical Twist
1	2	AA_DG1001DG1010:DG1018DG1019_AA	-1.705	-3.557	0.451	86.17	-154.982	178.228	-1.775	0.854	0.487	-77.491	-43.085	179.959
1	3	AA_DG1016DG1006:DG1024DG1025_AA	0.429	-1.83	3.197	4.493	3.855	-64.655	1.546	0.586	3.257	-3.597	4.191	-64.896
1	1	AA_DT1003DG1001:DG1019DT1021_AA	-0.697	1.383	-2.595	2.883	-0.141	-153.064	-0.712	-0.366	-2.59	0.072	1.482	-153.073
1	5	BB_DG1001DG1010:DG1018DG1019_BB	-1.767	-3.497	-0.807	85.506	-154.721	111.343	-1.78	0.867	0.578	-77.606	-42.889	178.182
1	4	BB_DT1003DG1001:DG1019DT1021_BB	-0.866	1.383	-2.571	3.288	1.664	-153.704	-0.706	-0.453	-2.57	-0.854	1.688	-153.718
1	7	CC_DG1001DG1010:DG1018DG1019_CC	-1.774	-3.504	-0.556	85.361	-155.402	132.059	-1.767	0.879	0.393	-77.803	-42.736	178.904
1	8	CC_DG1016DG1006:DG1024DG1025_CC	0.486	-1.896	3.121	4.094	3.385	-65.702	1.611	0.606	3.172	-3.114	3.768	-65.892
1	6	CC_DT1003DG1001:DG1019DT1021_CC	-0.467	1.324	-2.685	0.809	0.407	-153.652	-0.679	-0.242	-2.686	-0.209	0.415	-153.653
1	13	DD_DG1006DG1023:DG1005DG1024_DD	0.731	0.753	-3.423	0.681	-5.224	-31.17	-2.38	1.212	-3.271	9.635	1.256	-31.601
1	11	DD_DG1010DG1011:DG1017DG1018_DD	-0.268	-0.895	3.261	2.343	3.986	31.711	-2.325	0.898	3.101	7.247	-4.26	32.038
1	12	DD_DG1011DG1006:DG1024DG1017_DD	-1.443	-3.507	-0.07	-6.727	7.799	179.638	-1.754	0.722	-0.071	3.9	3.364	179.639
1	10	DD_DG1019DG1010:DG1018DG1022_DD	-1.114	-3.015	0.433	169.391	-48.365	117.506	-1.482	0.648	0.244	-24.259	-84.963	178.008
1	9	DD_DT1003DG1019:DG1022DT1021_DD	-1.216	-0.124	-2.667	2.228	0.33	115.815	-0.07	0.699	-2.682	0.194	-1.315	115.829

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.