A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 20-May-2020 number of released structures: 10752
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NDB ID: 6Y42  PDB ID: 6Y42 


Base Pair Hydrogen Bonding Classification

CSV Format

Model NumberPair NumberPair NameLeontis / Westhof ClassificationSaenger Classification
11E_DA2:DT38_F120
13E_DA4:DT36_F120
15E_DA6:DT34_F120
16E_DA7:DT33_F120
18E_DA9:DT31_F120
114E_DA15:DT25_F120
116E_DA17:DT23_F120
128E_DA29:DT11_F120
132E_DA33:DT7_F120
133E_DA34:DT6_F120
134E_DA35:DT5_F120
19E_DC10:DG30_F119
111E_DC12:DG28_F119
119E_DC20:DG20_F119
125E_DC26:DG14_F119
126E_DC27:DG13_F119
131E_DC32:DG8_F119
12E_DG3:DC37_F119
112E_DG13:DC27_F119
113E_DG14:DC26_F119
117E_DG18:DC22_F119
121E_DG22:DC18_F119
123E_DG24:DC16_F119
127E_DG28:DC12_F119
129E_DG30:DC10_F119
136E_DG37:DC3_F119
14E_DT5:DA35_F120
17E_DT8:DA32_F120
110E_DT11:DA29_F120
115E_DT16:DA24_F120
118E_DT19:DA21_F120
120E_DT21:DA19_F120
122E_DT23:DA17_F120
124E_DT25:DA15_F120
130E_DT31:DA9_F120
135E_DT36:DA4_F120

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)