NDB ID: 6DPN PDB ID: 6DPN 
RNA Base-Pairs, Stacking and other pairwise interactions
CSV FormatNucleotide 1 | Nucleotide 2 | Base-Pairs | Base-Stacking | Base-Phosphate |
---|
6DPN|1|B|A|1 | 6DPN|1|B|A|1 | | | 0BPh |
6DPN|1|B|A|1 | 6DPN|1|B|C|2 | | s35 | |
6DPN|1|B|A|3 | 6DPN|1|B|A|3 | | | 0BPh |
6DPN|1|B|A|3 | 6DPN|1|B|C|2 | | s53 | |
6DPN|1|B|A|3 | 6DPN|1|B|U|4 | | s35 | |
6DPN|1|B|C|2 | 6DPN|1|B|A|1 | | s53 | |
6DPN|1|B|C|2 | 6DPN|1|B|A|3 | | s35 | |
6DPN|1|B|C|2 | 6DPN|1|B|C|2 | | | 0BPh |
6DPN|1|B|U|4 | 6DPN|1|B|A|3 | | s53 | |
6DPN|1|B|U|4 | 6DPN|1|B|U|4 | | | n0BP |
6DPN|1|B|U|4 | 6DPN|1|b|C|5 | | s35 | |
6DPN|1|b|C|5 | 6DPN|1|B|U|4 | | s53 | |
6DPN|1|b|C|5 | 6DPN|1|b|C|5 | | | 0BPh |
6DPN|1|b|C|5 | 6DPN|1|b|G|6 | | s35 | |
6DPN|1|b|G|6 | 6DPN|1|b|C|5 | | s53 | |
6DPN|1|b|G|6 | 6DPN|1|b|G|6 | | | 0BPh |
Base-Pairs | Count (0) | Relative Frequency |
---|
Base-Phosphate | Count (5) | Relative Frequency |
---|
0BPh | 5 | 1.000 |
Base-Stacking | Count (1) | Relative Frequency |
---|
s53 | 1 | 1.000 |