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NDB ID: 6GMY  PDB ID: 6GMY 


RNA Base-Pairs, Stacking and other pairwise interactions

CSV Format

Nucleotide 1Nucleotide 2Base-PairsBase-StackingBase-Phosphate
6GMY|1|B|A|136GMY|1|B|A|130BPh
6GMY|1|B|A|136GMY|1|B|A|14s35
6GMY|1|B|A|136GMY|1|B|U|12s53
6GMY|1|B|A|146GMY|1|B|A|13s53
6GMY|1|B|A|146GMY|1|B|A|140BPh
6GMY|1|B|A|146GMY|1|B|G|15s35
6GMY|1|B|A|196GMY|1|B|A|190BPh
6GMY|1|B|A|196GMY|1|B|G|18s53
6GMY|1|B|A|196GMY|1|B|G|20s35
6GMY|1|B|C|166GMY|1|B|C|160BPh
6GMY|1|B|C|166GMY|1|B|C|17s35
6GMY|1|B|C|166GMY|1|B|G|15s53
6GMY|1|B|C|176GMY|1|B|C|16s53
6GMY|1|B|C|176GMY|1|B|C|170BPh
6GMY|1|B|C|176GMY|1|B|G|18s35
6GMY|1|B|G|116GMY|1|B|G|110BPh
6GMY|1|B|G|156GMY|1|B|A|14s53
6GMY|1|B|G|156GMY|1|B|C|16s35
6GMY|1|B|G|156GMY|1|B|G|150BPh
6GMY|1|B|G|186GMY|1|B|A|19s35
6GMY|1|B|G|186GMY|1|B|C|17s53
6GMY|1|B|G|186GMY|1|B|G|180BPh
6GMY|1|B|G|206GMY|1|B|A|19s53
6GMY|1|B|G|206GMY|1|B|G|200BPh
6GMY|1|B|U|126GMY|1|B|A|13s35
6GMY|1|B|U|126GMY|1|B|U|120BPh


Base-PairsCount (0)Relative Frequency
Base-PhosphateCount (10)Relative Frequency
0BPh101.000
Base-StackingCount (3)Relative Frequency
s5331.000

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)