A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 5-Aug-2020 number of released structures: 10886
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NDB ID: 6KQG  PDB ID: 6KQG 


RNA Base-Pairs, Stacking and other pairwise interactions

CSV Format

Nucleotide 1Nucleotide 2Base-PairsBase-StackingBase-Phosphate
6KQG|1|I|A|76KQG|1|I|A|70BPh
6KQG|1|I|A|76KQG|1|I|G|6s53
6KQG|1|I|C|26KQG|1|I|C|3s35
6KQG|1|I|C|36KQG|1|I|C|2s53
6KQG|1|I|C|36KQG|1|I|C|30BPh
6KQG|1|I|C|36KQG|1|I|U|4s35
6KQG|1|I|C|56KQG|1|I|C|50BPh
6KQG|1|I|C|56KQG|1|I|G|6s35
6KQG|1|I|C|56KQG|1|I|U|4s53
6KQG|1|I|G|66KQG|1|I|A|7s35
6KQG|1|I|G|66KQG|1|I|C|5s53
6KQG|1|I|G|66KQG|1|I|G|60BPh
6KQG|1|I|U|46KQG|1|I|C|3s53
6KQG|1|I|U|46KQG|1|I|C|5s35
6KQG|1|I|U|46KQG|1|I|U|40BPh


Base-PairsCount (0)Relative Frequency
Base-PhosphateCount (5)Relative Frequency
0BPh51.000
Base-StackingCount (2)Relative Frequency
s5321.000

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)