A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 20-Oct-2021 number of released structures: 11724
Search for released structures

NDB ID: 6KQL  PDB ID: 6KQL 


RNA Base-Pairs, Stacking and other pairwise interactions

CSV Format

Nucleotide 1Nucleotide 2Base-PairsBase-StackingBase-Phosphate
6KQL|1|I|A|76KQL|1|I|A|70BPh
6KQL|1|I|A|76KQL|1|I|G|6s53
6KQL|1|I|C|56KQL|1|I|C|50BPh
6KQL|1|I|C|56KQL|1|I|G|6s35
6KQL|1|I|G|66KQL|1|I|A|7s35
6KQL|1|I|G|66KQL|1|I|C|5s53
6KQL|1|I|G|66KQL|1|I|G|60BPh


Base-PairsCount (0)Relative Frequency
Base-PhosphateCount (3)Relative Frequency
0BPh31.000
Base-StackingCount (1)Relative Frequency
s5311.000

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)