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NDB ID: 6OWL  PDB ID: 6OWL 


RNA Base-Pairs, Stacking and other pairwise interactions

CSV Format

Nucleotide 1Nucleotide 2Base-PairsBase-StackingBase-Phosphate
6OWL|1|A|A|106OWL|1|A|A|100BPh
6OWL|1|A|A|106OWL|1|A|A|9s53
6OWL|1|A|A|106OWL|1|A|G|11s35
6OWL|1|A|A|106OWL|1|A|U|7||||4_647cWW
6OWL|1|A|A|106OWL|1|A|U|8||||4_647s55
6OWL|1|A|A|10||||4_6476OWL|1|A|A|10||||4_6470BPh
6OWL|1|A|A|10||||4_6476OWL|1|A|A|9||||4_647s53
6OWL|1|A|A|10||||4_6476OWL|1|A|G|11||||4_647s35
6OWL|1|A|A|10||||4_6476OWL|1|A|U|7cWW
6OWL|1|A|A|10||||4_6476OWL|1|A|U|8s55
6OWL|1|A|A|56OWL|1|A|A|50BPh
6OWL|1|A|A|56OWL|1|A|C|6s35
6OWL|1|A|A|56OWL|1|A|U|12||||4_647cWW
6OWL|1|A|A|5||||4_6476OWL|1|A|A|5||||4_6470BPh
6OWL|1|A|A|5||||4_6476OWL|1|A|C|6||||4_647s35
6OWL|1|A|A|5||||4_6476OWL|1|A|U|12cWW
6OWL|1|A|A|96OWL|1|A|A|10s35
6OWL|1|A|A|96OWL|1|A|A|90BPh
6OWL|1|A|A|96OWL|1|A|A|9||||4_647s55
6OWL|1|A|A|96OWL|1|A|U|8s53
6OWL|1|A|A|96OWL|1|A|U|8||||4_647cWW
6OWL|1|A|A|9||||4_6476OWL|1|A|A|10||||4_647s35
6OWL|1|A|A|9||||4_6476OWL|1|A|A|9s55
6OWL|1|A|A|9||||4_6476OWL|1|A|A|9||||4_6470BPh
6OWL|1|A|A|9||||4_6476OWL|1|A|U|8cWW
6OWL|1|A|A|9||||4_6476OWL|1|A|U|8||||4_647s53
6OWL|1|A|C|136OWL|1|A|C|130BPh
6OWL|1|A|C|136OWL|1|A|U|12s53
6OWL|1|A|C|13||||4_6476OWL|1|A|C|13||||4_6470BPh
6OWL|1|A|C|13||||4_6476OWL|1|A|U|12||||4_647s53
6OWL|1|A|C|66OWL|1|A|A|5s53
6OWL|1|A|C|66OWL|1|A|C|60BPh
6OWL|1|A|C|66OWL|1|A|G|11||||4_647cWW
6OWL|1|A|C|66OWL|1|A|U|7s35
6OWL|1|A|C|6||||4_6476OWL|1|A|A|5||||4_647s53
6OWL|1|A|C|6||||4_6476OWL|1|A|C|6||||4_6470BPh
6OWL|1|A|C|6||||4_6476OWL|1|A|G|11cWW
6OWL|1|A|C|6||||4_6476OWL|1|A|U|7||||4_647s35
6OWL|1|A|G|116OWL|1|A|A|10s53
6OWL|1|A|G|116OWL|1|A|C|6||||4_647cWW
6OWL|1|A|G|116OWL|1|A|G|110BPh
6OWL|1|A|G|116OWL|1|A|U|12s35
6OWL|1|A|G|116OWL|1|A|U|7||||4_647s55
6OWL|1|A|G|11||||4_6476OWL|1|A|A|10||||4_647s53
6OWL|1|A|G|11||||4_6476OWL|1|A|C|6cWW
6OWL|1|A|G|11||||4_6476OWL|1|A|G|11||||4_6470BPh
6OWL|1|A|G|11||||4_6476OWL|1|A|U|12||||4_647s35
6OWL|1|A|G|11||||4_6476OWL|1|A|U|7s55
6OWL|1|A|U|126OWL|1|A|A|5||||4_647cWW
6OWL|1|A|U|126OWL|1|A|C|13s35
6OWL|1|A|U|126OWL|1|A|G|11s53
6OWL|1|A|U|126OWL|1|A|U|120BPh
6OWL|1|A|U|12||||4_6476OWL|1|A|A|5cWW
6OWL|1|A|U|12||||4_6476OWL|1|A|C|13||||4_647s35
6OWL|1|A|U|12||||4_6476OWL|1|A|G|11||||4_647s53
6OWL|1|A|U|12||||4_6476OWL|1|A|U|12||||4_6470BPh
6OWL|1|A|U|76OWL|1|A|A|10||||4_647cWW
6OWL|1|A|U|76OWL|1|A|C|6s53
6OWL|1|A|U|76OWL|1|A|G|11||||4_647s55
6OWL|1|A|U|76OWL|1|A|U|70BPh
6OWL|1|A|U|76OWL|1|A|U|8s35
6OWL|1|A|U|7||||4_6476OWL|1|A|A|10cWW
6OWL|1|A|U|7||||4_6476OWL|1|A|C|6||||4_647s53
6OWL|1|A|U|7||||4_6476OWL|1|A|G|11s55
6OWL|1|A|U|7||||4_6476OWL|1|A|U|7||||4_6470BPh
6OWL|1|A|U|7||||4_6476OWL|1|A|U|8||||4_647s35
6OWL|1|A|U|86OWL|1|A|A|10||||4_647s55
6OWL|1|A|U|86OWL|1|A|A|9s35
6OWL|1|A|U|86OWL|1|A|A|9||||4_647cWW
6OWL|1|A|U|86OWL|1|A|U|7s53
6OWL|1|A|U|86OWL|1|A|U|80BPh
6OWL|1|A|U|8||||4_6476OWL|1|A|A|10s55
6OWL|1|A|U|8||||4_6476OWL|1|A|A|9cWW
6OWL|1|A|U|8||||4_6476OWL|1|A|A|9||||4_647s35
6OWL|1|A|U|8||||4_6476OWL|1|A|U|7||||4_647s53
6OWL|1|A|U|8||||4_6476OWL|1|A|U|8||||4_6470BPh
6OWL|1|B|G|16OWL|1|C|G|1s55
6OWL|1|B|G|1||||4_6476OWL|1|C|G|1||||4_647s55
6OWL|1|C|G|16OWL|1|B|G|1s55
6OWL|1|C|G|16OWL|1|C|G|1n0BP
6OWL|1|C|G|1||||4_6476OWL|1|B|G|1||||4_647s55
6OWL|1|C|G|1||||4_6476OWL|1|C|G|1||||4_647n0BP


Base-PairsCount (8)Relative Frequency
cWW81.000
Base-PhosphateCount (18)Relative Frequency
0BPh181.000
Base-StackingCount (13)Relative Frequency
s5360.462
s5570.538

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)